RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 WASH2PQ6VEQ5 465 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 FAM92BQ6ZTR7 304 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 TRAPPC5Q8IUR0 188 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 APLFQ8IW19 511 aaPredicted RBP4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 HORMAD2Q8N7B1 307 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 SIDT2Q8NBJ9 832 aaKnown RBP4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 GPR26Q8NDV2 337 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 DNAAF1Q8NEP3 725 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 SSC4DQ8WTU2 575 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 CT55Q8WUE5 264 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 CNOT9Q92600 299 aaKnown RBP4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 SYN2Q92777 582 aaPredicted RBP4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC25A28Q96A46 364 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 FAF2Q96CS3 445 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 TTC25Q96NG3 672 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 FCRL4Q96PJ5 515 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 ITPAQ9BY32 194 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 POLDIP3Q9BY77 421 aaKnown RBP4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 XPO4Q9C0E2 1151 aaKnown RBP4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 ACTL8Q9H568 366 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 MAGEE1Q9HCI5 957 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 LHX9Q9NQ69 397 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 HCN3Q9P1Z3 774 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 ZNF624Q9P2J8 865 aaPredicted RBP4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 EPHA6Q9UF33 1036 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC23A2Q9UGH3 650 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 RARRES3Q9UL19 164 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 OSGIN2Q9Y236 505 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 ZNF711Q9Y462 761 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 LRBAP50851 2863 aa4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 SPENQ96T58 3664 aaKnown RBP4.86□□□□□ -1.63
AMBRA1-209ENST00000529963 OR52A4PA6NMU1 304 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 KCNK1O00180 336 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 KIF1CO43896 1103 aaKnown RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 CEP104O60308 925 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 KCNJ13O60928 360 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 MTX2O75431 263 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 PROSCO94903 275 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 SERPING1P05155 500 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 MMP2P08253 660 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 PIRTP0C851 137 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 PORP16435 677 aaPredicted RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 TNFRSF1BP20333 461 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 PTPN4P29074 926 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 TNNT3P45378 269 aaPredicted RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 RPS3AP61247 264 aaKnown RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 RPS15P62841 145 aaKnown RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 TPM4P67936 248 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 IFI35P80217 286 aaPredicted RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 PDE1BQ01064 536 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 PPIDQ08752 370 aaKnown RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 AP1B1Q10567 949 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 ZBTB17Q13105 803 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 GPR18Q14330 331 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 PDK1Q15118 436 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 HIST2H2BCQ6DN03 193 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 ALKBH5Q6P6C2 394 aaKnown RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 KRT74Q7RTS7 529 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 SYVN1Q86TM6 617 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 TMEM135Q86UB9 458 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 NT5DC3Q86UY8 548 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 KMT5CQ86Y97 462 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 PQLC3Q8N755 202 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 OR8K5Q8NH50 307 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 RFWD2Q8NHY2 731 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 GDAP1Q8TB36 358 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 BRSK1Q8TDC3 778 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 RAB40AQ8WXH6 277 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 IMP4Q96G21 291 aaKnown RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC41A2Q96JW4 573 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 NAP1L5Q96NT1 182 aaPredicted RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 VPS35Q96QK1 796 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 FRG2BQ96QU4 278 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 TRIB3Q96RU7 358 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC25A23Q9BV35 468 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 MAK16Q9BXY0 300 aaKnown RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 RAB33BQ9H082 229 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC25A51Q9H1U9 297 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 MUC13Q9H3R2 512 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 BRF2Q9HAW0 419 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 SLC40A1Q9NP59 571 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 SEMA4BQ9NPR2 832 aaPredicted RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 DECR2Q9NUI1 292 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 UVRAGQ9P2Y5 699 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 TRIM10Q9UDY6 481 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 LYVE1Q9Y5Y7 322 aa4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 UTP20O75691 2785 aaKnown RBP4.85□□□□□ -1.63
AMBRA1-209ENST00000529963 PRRC2CQ9Y520 2896 aaKnown RBP4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 A0A087X0T9 212 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 IGHV5-51A0A0C4DH38 117 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 LRRD1A4D1F6 860 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 TMEM247A6NEH6 219 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 TLCD2A6NGC4 264 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 ZNF487B1APH4 448 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 K7EM74 188 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 LCKP06239 509 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 FGF2P09038 288 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 H2AFZP0C0S5 128 aa4.84□□□□□ -1.63
AMBRA1-209ENST00000529963 FAM228BP0C875 321 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms