RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 WDR41Q9HAD4 459 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 POPDC3Q9HBV1 291 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 SNX15Q9NRS6 342 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 IKZF3Q9UKT9 509 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 CHMP2BQ9UQN3 213 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 JRKLQ9Y4A0 524 aa10.6□□□□□ -0.71
CMTM1-211ENST00000528484 CHCHD2Q9Y6H1 151 aaPredicted RBP10.6□□□□□ -0.71
CMTM1-211ENST00000528484 SH3D21A4FU49 640 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 RTCAO00442 366 aaKnown RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 FGF17O60258 216 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 LRATO95237 230 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 IGKV3-11P04433 115 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 FREM3P0C091 2139 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 TMIGD3P0DMS9 266 aaPredicted RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 CYP4B1P13584 511 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 CD53P19397 219 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ELK3P41970 407 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 HSPA7P48741 367 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 CDK9P50750 372 aaKnown RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 DIO3P55073 304 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 WNT3P56703 355 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 HERVK_113P63132 956 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ERVK-8P63133 956 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 EEF1A1P68104 462 aaKnown RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 PHEXP78562 749 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 MGAT5Q09328 741 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 SLAMF1Q13291 335 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 TBCCQ15814 346 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 CDKL4Q5MAI5 379 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 Q5PR19 223 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 EEF1A1P5Q5VTE0 462 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 SULT1C3Q6IMI6 304 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 MED27Q6P2C8 311 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ADGRD1Q6QNK2 874 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ZNF793Q6ZN11 406 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 VN1R5Q7Z5H4 357 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 OR4N5Q8IXE1 308 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 SIMC1Q8NDZ2 872 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 RIT1Q92963 219 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ABTB1Q969K4 478 aaPredicted RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 RGMAQ96B86 450 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ANKRD9Q96BM1 317 aaPredicted RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 PPWD1Q96BP3 646 aaKnown RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 DTNBP1Q96EV8 351 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 CMTM7Q96FZ5 175 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 RILPQ96NA2 401 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ZFP3Q96NJ6 502 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 SECISBP2Q96T21 854 aaKnown RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 BDH2Q9BUT1 245 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 REPIN1Q9BWE0 567 aaKnown RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 SFXN3Q9BWM7 321 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ERVK-6Q9BXR3 956 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 MS4A8Q9BY19 250 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 DERL2Q9GZP9 239 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 TRMT1Q9NXH9 659 aaKnown RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 CD274Q9NZQ7 290 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 TXNDC16Q9P2K2 825 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ADGRE2Q9UHX3 823 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 CNOT11Q9UKZ1 510 aaKnown RBP10.59□□□□□ -0.71
CMTM1-211ENST00000528484 ERVK-19Q9WJR5 959 aa10.59□□□□□ -0.71
CMTM1-211ENST00000528484 C2orf92A0A1B0GVN3 265 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 MBD3L4A6NDZ8 208 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 MBD3L3A6NE82 208 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 MBD3L5A6NJ08 208 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 CCNT2O60583 730 aaKnown RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 SH3BGRLO75368 114 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 TRIM3O75382 744 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 SCELO95171 688 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 ACSL3O95573 720 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 TBX6O95947 436 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 TGFB1P01137 390 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 HRGP04196 525 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 HPNP05981 417 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 PCSK6P29122 969 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 GGT5P36269 586 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 AGFG1P52594 562 aaKnown RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 TAS2R39P59534 338 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 ATP6V0D1P61421 351 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 IGLV3-21P80748 117 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 TNFRSF17Q02223 184 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 CHIT1Q13231 466 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 ZNF267Q14586 743 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 MORF4L2Q15014 288 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 SETDB1Q15047 1291 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 EBPQ15125 230 aaKnown RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 SPRED3Q2MJR0 410 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 C18orf21Q32NC0 220 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 MSS51Q4VC12 460 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 NHSL2Q5HYW2 709 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 HP1BP3Q5SSJ5 553 aaPredicted RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 VASNQ6EMK4 673 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 OR4C11Q6IEV9 310 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 TRMT10BQ6PF06 316 aaKnown RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 LYPD8Q6UX82 237 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 CAPN12Q6ZSI9 719 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 LRRC70Q7Z2Q7 622 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 LUZP2Q86TE4 346 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 GPR180Q86V85 440 aa10.58□□□□□ -0.72
CMTM1-211ENST00000528484 ZC3HC1Q86WB0 502 aaKnown RBP10.58□□□□□ -0.72
CMTM1-211ENST00000528484 LRRC75A-AS1Q8N1F1 130 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms