RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ZBTB26Q9HCK0 441 aa8.43□□□□□ -1.06
CMTM1-210ENST00000528441 FARSBQ9NSD9 589 aaKnown RBP8.43□□□□□ -1.06
CMTM1-210ENST00000528441 SACM1LQ9NTJ5 587 aa8.43□□□□□ -1.06
CMTM1-210ENST00000528441 TEX10Q9NXF1 929 aaPredicted RBP8.43□□□□□ -1.06
CMTM1-210ENST00000528441 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.43□□□□□ -1.06
CMTM1-210ENST00000528441 ENTPD4Q9Y227 616 aa8.43□□□□□ -1.06
CMTM1-210ENST00000528441 TSC22D4Q9Y3Q8 395 aa8.43□□□□□ -1.06
CMTM1-210ENST00000528441 PCDHGB6Q9Y5F9 930 aa8.43□□□□□ -1.06
CMTM1-210ENST00000528441 V9GYY5 206 aaPredicted RBP8.43□□□□□ -1.06
CMTM1-210ENST00000528441 TENM4Q6N022 2769 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 C2orf92A0A1B0GVN3 265 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 A0A1W2PPM1 405 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 A0A1W2PR48 441 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 C1orf226A1L170 272 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 CAPN14A8MX76 684 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 MANBAO00462 879 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 PROM1O43490 865 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 ASNA1O43681 348 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 PCDH7O60245 1069 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 DLX3O60479 287 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 CDH16O75309 829 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 SLU7O95391 586 aaKnown RBP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 RNF224P0DH78 156 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 COL8A1P27658 744 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 GCAP28676 217 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 TRHRP34981 398 aaPredicted RBP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 HSD17B3P37058 310 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 FEN1P39748 380 aaKnown RBP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 MASP1P48740 699 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 XKP51811 444 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 NR0B1P51843 470 aaKnown RBP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 TDGF1P3P51864 188 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 SMSP52788 366 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 PKNOX1P55347 436 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 PPIAP62937 165 aaKnown RBP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 KCNJ2P63252 427 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 RPP38P78345 283 aaKnown RBP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 GUCA2AQ02747 115 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 PCDH1Q08174 1060 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 LCP2Q13094 533 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 E2F2Q14209 437 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 TOMM20Q15388 145 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 UNC50Q53HI1 259 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 TCHHL1Q5QJ38 904 aaPredicted RBP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 PRAMEF20Q5VT98 475 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 MDGA2Q7Z553 956 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 SLC22A16Q86VW1 577 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 LIX1Q8N485 282 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 PPP1R14CQ8TAE6 165 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 FBXL20Q96IG2 436 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 SHCBP1LQ9BZQ2 653 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 DEFB127Q9H1M4 99 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 CENPHQ9H3R5 247 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 DDX31Q9H8H2 851 aaKnown RBP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 BRF2Q9HAW0 419 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 ALKBH4Q9NXW9 302 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 VPS29Q9UBQ0 182 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 FETUBQ9UGM5 382 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 TINAGQ9UJW2 476 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 ZNF223Q9UK11 482 aaPredicted RBP8.42□□□□□ -1.06
CMTM1-210ENST00000528441 GRID1Q9ULK0 1009 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 TIMM22Q9Y584 194 aa8.42□□□□□ -1.06
CMTM1-210ENST00000528441 SPENQ96T58 3664 aaKnown RBP8.41□□□□□ -1.06
CMTM1-210ENST00000528441 CLEC18AA5D8T8 446 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 ASPDHA6ND91 283 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 WASHC1A8K0Z3 465 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 FOXO6A8MYZ6 492 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 PPP6CO00743 305 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 TP53I11O14683 189 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 PGRMC2O15173 223 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 ZNHIT1O43257 154 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 LRATO95237 230 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 CHEK2O96017 543 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 ENO1P06733 434 aaKnown RBP8.41□□□□□ -1.06
CMTM1-210ENST00000528441 TUBBP07437 444 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 STSP08842 583 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 SLC35E2P0CK97 266 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 NEFHP12036 1026 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 HSD3B1P14060 373 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 PORP16435 677 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-210ENST00000528441 KRT4P19013 534 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 IMPDH1P20839 514 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 HSD3B2P26439 372 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 SERPINB3P29508 390 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 SSTR4P31391 388 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 PTGER1P34995 402 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 PTGS2P35354 604 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 CA7P43166 264 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 DNASE1L1P49184 302 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 TMED10P49755 219 aaKnown RBP8.41□□□□□ -1.06
CMTM1-210ENST00000528441 PRKAA2P54646 552 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 HMGCS1Q01581 520 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 CSTF3Q12996 717 aaKnown RBP8.41□□□□□ -1.06
CMTM1-210ENST00000528441 NNATQ16517 81 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 C3AR1Q16581 482 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 SPIN4Q56A73 249 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 ZNF324BQ6AW86 544 aaPredicted RBP8.41□□□□□ -1.06
CMTM1-210ENST00000528441 CLEC18BQ6UXF7 455 aa8.41□□□□□ -1.06
CMTM1-210ENST00000528441 ZYG11AQ6WRX3 759 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms