RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 SF3B6Q9Y3B4 125 aaKnown RBP13.94□□□□□ -0.18
CAPN1-214ENST00000528165 AUP1Q9Y679 476 aa13.94□□□□□ -0.18
CAPN1-214ENST00000528165 COCHO43405 550 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 TBL1XO60907 577 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 APOL3O95236 402 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 GBAP04062 536 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 H1F0P07305 194 aaKnown RBP13.93□□□□□ -0.18
CAPN1-214ENST00000528165 FGF9P31371 208 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-214ENST00000528165 DSTNP60981 165 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 ADAM15Q13444 863 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 KCNC3Q14003 757 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 FCN2Q15485 313 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 LDLRAD1Q5T700 205 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 REEP3Q6NUK4 255 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF783Q6ZMS7 281 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 CDH24Q86UP0 819 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 SLC30A8Q8IWU4 369 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 OR7G3Q8NG95 312 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.93□□□□□ -0.18
CAPN1-214ENST00000528165 BRI3BPQ8WY22 251 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 MSANTD3Q96H12 275 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF582Q96NG8 517 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-214ENST00000528165 POLDIP3Q9BY77 421 aaKnown RBP13.93□□□□□ -0.18
CAPN1-214ENST00000528165 SPNS1Q9H2V7 528 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 RANBP3Q9H6Z4 567 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-214ENST00000528165 SYNDIG1Q9H7V2 258 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 PCDH10Q9P2E7 1040 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 SCN8AQ9UQD0 1980 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 NPIPB15A6NHN6 443 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-214ENST00000528165 C5orf58C9J3I9 102 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 QSOX1O00391 747 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 CHP2O43745 196 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 GPR37L1O60883 481 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 DGKGP49619 791 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 CTBP2P56545 445 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 RPS13P62277 151 aaKnown RBP13.93□□□□□ -0.18
CAPN1-214ENST00000528165 BTG1P62324 171 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 MC1RQ01726 317 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 NAE1Q13564 534 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 RIN1Q13671 783 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 SNAPC1Q16533 368 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 HECTD3Q5T447 861 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 PGBD2Q6P3X8 592 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 DEF8Q6ZN54 512 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF222Q9UK12 451 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 ITM2BQ9Y287 266 aa13.93□□□□□ -0.18
CAPN1-214ENST00000528165 CCDC88CQ9P219 2028 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 A0A0A6YYJ9 748 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 PIPSLA2A3N6 862 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 NCR1O76036 304 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 CTRB1P17538 263 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 AGFG1P52594 562 aaKnown RBP13.92□□□□□ -0.18
CAPN1-214ENST00000528165 ATP12AP54707 1039 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 ALDH6A1Q02252 535 aaKnown RBP13.92□□□□□ -0.18
CAPN1-214ENST00000528165 LRRC32Q14392 662 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF267Q14586 743 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-214ENST00000528165 RPS26P11Q5JNZ5 115 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-214ENST00000528165 PLEKHS1Q5SXH7 462 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 CTRB2Q6GPI1 263 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 KIF18BQ86Y91 864 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 DNAJC5GQ8N7S2 189 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 ZFP41Q8N8Y5 198 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 BRD9Q9H8M2 597 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 SEMA3GQ9NS98 782 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 ZSCAN32Q9NX65 697 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 TAS2R7Q9NYW3 318 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 NINQ8N4C6 2090 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 TRPM7Q96QT4 1865 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 TMEM129A0AVI4 362 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 INPPL1O15357 1258 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 SMAD6O43541 496 aaKnown RBP13.92□□□□□ -0.18
CAPN1-214ENST00000528165 VNN2O95498 520 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 RAF1P04049 648 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF250P15622 560 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 CSKP41240 450 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 BDKRB1P46663 353 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 GPR17Q13304 367 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 KLHL12Q53G59 568 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 ESX1Q8N693 406 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 UCN3Q969E3 161 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 OTULINQ96BN8 352 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 FAM8A1Q9UBU6 413 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 ASB4Q9Y574 426 aa13.92□□□□□ -0.18
CAPN1-214ENST00000528165 KPNA5O15131 536 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 TPOP07202 933 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 FURINP09958 794 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 HK1P19367 917 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 CSTF1Q05048 431 aaKnown RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 C2orf80Q0P641 193 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 POU4F3Q15319 338 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 BCL2L15Q5TBC7 163 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 TCTN3Q6NUS6 607 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 CRTC1Q6UUV9 634 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 OTOP2Q7RTS6 562 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 COMMD7Q86VX2 200 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 FBXO22Q8NEZ5 403 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 PARK7Q99497 189 aaKnown RBP13.91□□□□□ -0.18
CAPN1-214ENST00000528165 ISYNA1Q9NPH2 558 aa13.91□□□□□ -0.18
CAPN1-214ENST00000528165 ZNF224Q9NZL3 707 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms