RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ABCA12Q86UK0 2595 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 PSMD12O00232 456 aaPredicted RBP16.18■□□□□ 0.18
CCS-204ENST00000526066 CYR61O00622 381 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 ANKRD28O15084 1053 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 ATXN8OSP0DMR3 200 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 PRPS1L1P21108 318 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 CPN2P22792 545 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 TLX1P31314 330 aaPredicted RBP16.18■□□□□ 0.18
CCS-204ENST00000526066 XCR1P46094 333 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 CLDN8P56748 225 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 HEPACAMQ14CZ8 416 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 SYT16Q17RD7 645 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 NDUFAF5Q5TEU4 345 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 IGFL3Q6UXB1 125 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 TMEM132CQ8N3T6 1108 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 ANKS4BQ8N8V4 417 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 ZNF764Q96H86 408 aaPredicted RBP16.18■□□□□ 0.18
CCS-204ENST00000526066 EGLN2Q96KS0 407 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 PHF12Q96QT6 1004 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 ZNF385DQ9H6B1 395 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 WDR54Q9H977 334 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 WDR41Q9HAD4 459 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 C14orf105Q9NVL8 296 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 TMEM45AQ9NWC5 275 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 TEX10Q9NXF1 929 aaPredicted RBP16.18■□□□□ 0.18
CCS-204ENST00000526066 EHD3Q9NZN3 535 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 ZNF282Q9UDV7 671 aaPredicted RBP16.18■□□□□ 0.18
CCS-204ENST00000526066 BAIAP2L1Q9UHR4 511 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 PCDHA9Q9Y5H5 950 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 SEC16AO15027 2179 aa16.18■□□□□ 0.18
CCS-204ENST00000526066 C1orf226A1L170 272 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 VSTM2BA6NLU5 285 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 NDUFAB1O14561 156 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 BMP10O95393 424 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 AIFM1O95831 613 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 FHP07954 510 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 IL3P08700 152 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 NR2F6P10588 404 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 JAK1P23458 1154 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 ELAVL4P26378 380 aaKnown RBP16.17■□□□□ 0.18
CCS-204ENST00000526066 RPL3P39023 403 aaKnown RBP16.17■□□□□ 0.18
CCS-204ENST00000526066 STX1BP61266 288 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 OCA2Q04671 838 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 C2orf80Q0P641 193 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 PTGR1Q14914 329 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 RPS6KA2Q15349 733 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 MRPL14Q6P1L8 145 aaKnown RBP16.17■□□□□ 0.18
CCS-204ENST00000526066 ZC3H7AQ8IWR0 971 aaKnown RBP16.17■□□□□ 0.18
CCS-204ENST00000526066 ZNF595Q8IYB9 648 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 BCAS4Q8TDM0 211 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 MTERF3Q96E29 417 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 PEX11GQ96HA9 241 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 RUBCNLQ9H714 662 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 ATP13A2Q9NQ11 1180 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 LANCL2Q9NS86 450 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 P4HTMQ9NXG6 502 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 ZIM2Q9NZV7 527 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 HEY2Q9UBP5 337 aa16.17■□□□□ 0.18
CCS-204ENST00000526066 NXT1Q9UKK6 140 aaKnown RBP16.17■□□□□ 0.18
CCS-204ENST00000526066 MRPS33Q9Y291 106 aaKnown RBP16.17■□□□□ 0.18
CCS-204ENST00000526066 SCN3AQ9NY46 2000 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 FER1L5A0AVI2 2057 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 HNRNPRO43390 633 aaKnown RBP16.16■□□□□ 0.18
CCS-204ENST00000526066 TBX19O60806 448 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 CCDC22O60826 627 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 CYC1P08574 325 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 NCF2P19878 526 aaPredicted RBP16.16■□□□□ 0.18
CCS-204ENST00000526066 DDCP20711 480 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 PDE7AQ13946 482 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 SQLEQ14534 574 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 NKG7Q16617 165 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 OR52E8Q6IFG1 317 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 R3HCC1LQ7Z5L2 792 aaKnown RBP16.16■□□□□ 0.18
CCS-204ENST00000526066 RIMKLAQ8IXN7 391 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 MIER2Q8N344 545 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 CPSF7Q8N684 471 aaKnown RBP16.16■□□□□ 0.18
CCS-204ENST00000526066 CCDC197Q8NCU1 140 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 ST6GALNAC3Q8NDV1 305 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 OR2Y1Q8NGV0 311 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 CLHC1Q8NHS4 586 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 CDC26Q8NHZ8 85 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 STT3BQ8TCJ2 826 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 TANKQ92844 425 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 MARK4Q96L34 752 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 CSF3RQ99062 836 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 YIPF2Q9BWQ6 316 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 DPY30Q9C005 99 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 REEP4Q9H6H4 257 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 RPF2Q9H7B2 306 aaKnown RBP16.16■□□□□ 0.18
CCS-204ENST00000526066 TAS2R7Q9NYW3 318 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 CTSFQ9UBX1 484 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 ATP6V1HQ9UI12 483 aa16.16■□□□□ 0.18
CCS-204ENST00000526066 EXO1Q9UQ84 846 aaKnown RBP16.16■□□□□ 0.18
CCS-204ENST00000526066 FAM227AF5H4B4 570 aa16.15■□□□□ 0.18
CCS-204ENST00000526066 CLDN4O14493 209 aa16.15■□□□□ 0.18
CCS-204ENST00000526066 KLF7O75840 302 aaPredicted RBP16.15■□□□□ 0.18
CCS-204ENST00000526066 ZGLP1P0C6A0 271 aa16.15■□□□□ 0.18
CCS-204ENST00000526066 DDX5P17844 614 aaKnown RBP16.15■□□□□ 0.18
CCS-204ENST00000526066 GPX3P22352 226 aa16.15■□□□□ 0.18
CCS-204ENST00000526066 ITGA3P26006 1051 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms