RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PTCHD3Q3KNS1 767 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 RAB41Q5JT25 222 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 THOC6Q86W42 341 aaKnown RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 REM2Q8IYK8 340 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 Q8N9G6 341 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 DRAXINQ8NBI3 349 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 MRI1Q9BV20 369 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 MAGEH1Q9H213 219 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 FAM118AQ9NWS6 357 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 BPIP17213 487 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 OAZ1P54368 228 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF648Q5T619 568 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 ATG9BQ674R7 924 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 OR51A7Q8NH64 312 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 ADAM19Q9H013 955 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 WDR26Q9H7D7 661 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 UNC119BA6NIH7 251 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 LRRC10BA6NIK2 292 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 G6PDP11413 515 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 SHMT1P34896 483 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 GPX6P59796 221 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF662Q6ZS27 426 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 HMGN2P46Q86SG4 172 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 UEVLDQ8IX04 471 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 HS3ST5Q8IZT8 346 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 ARL14EPQ8N8R7 260 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 OR8D2Q9GZM6 311 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 PIGBOS1A0A0B4J2F0 54 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 TTC24A2A3L6 582 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 HTRA2O43464 458 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 RPL13AP40429 203 aaKnown RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 NPRL3Q12980 569 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 BTN1A1Q13410 526 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 PCGF3Q3KNV8 242 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 FLYWCH1Q4VC44 716 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 OR8K5Q8NH50 307 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 HPSE2Q8WWQ2 592 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 NTAN1Q96AB6 310 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 SNX27Q96L92 541 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 REEP4Q9H6H4 257 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF286AQ9HBT8 521 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 NAALAD2Q9Y3Q0 740 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 KLK3P07288 261 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 GNSP15586 552 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 RPS13P62277 151 aaKnown RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 RPP30P78346 268 aaKnown RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 CCINQ13939 588 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF630Q2M218 657 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 COQ5Q5HYK3 327 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 HES5Q5TA89 166 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 OR2T33Q8NG76 320 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 OR9I1Q8NGQ6 314 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 PITX2Q99697 317 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 OCSTAMPQ9BR26 566 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 FKRPQ9H9S5 495 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 POLMQ9NP87 494 aaPredicted RBP13.13□□□□□ -0.31
LRRK1-202ENST00000525284 GLTPQ9NZD2 209 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 ABRACLQ9P1F3 81 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 PCDHGA5Q9Y5G8 931 aa13.13□□□□□ -0.31
LRRK1-202ENST00000525284 PREX1Q8TCU6 1659 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 SLC1A7O00341 560 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 P2RX1P51575 399 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 CLCNKAP51800 687 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 TAAR8Q969N4 342 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 RSPRY1Q96DX4 576 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 RXFP3Q9NSD7 469 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 FAM86C1Q9NVL1 165 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 GALPQ9UBC7 116 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 VWDEQ8N2E2 1590 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 LOC730098B7Z3J9 87 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 HTR3BO95264 441 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 OXSR1O95747 527 aaPredicted RBP13.12□□□□□ -0.31
LRRK1-202ENST00000525284 TMEM225BP0DP42 221 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 M6PRP20645 277 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 NDST2P52849 883 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 SLX4IPQ5VYV7 408 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 OR4E2Q8NGC2 313 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 CHTF18Q8WVB6 975 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 ZNF559Q9BR84 538 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 ST6GALNAC5Q9BVH7 336 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 OR51B5Q9H339 312 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 KLHL9Q9P2J3 617 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 NRXN1Q9ULB1 1477 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 TGM4P49221 684 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
LRRK1-202ENST00000525284 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 NPAS3Q8IXF0 933 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 RBM12BQ8IXT5 1001 aaKnown RBP13.12□□□□□ -0.31
LRRK1-202ENST00000525284 KAZALD1Q96I82 304 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 QPCTLQ9NXS2 382 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 STUB1Q9UNE7 303 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 OR4F6Q8NGB9 312 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 OR51T1Q8NGJ9 327 aa13.12□□□□□ -0.31
LRRK1-202ENST00000525284 SLC2A12Q8TD20 617 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms