RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 NPHP4O75161 1426 aaPredicted RBP4.17□□□□□ -1.74
CD44-213ENST00000525209 SPATA31A6Q5VVP1 1343 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 KIDINS220Q9ULH0 1771 aa4.17□□□□□ -1.74
CD44-213ENST00000525209 IQGAP1P46940 1657 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ZNF142P52746 1687 aaPredicted RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 SYCP2Q9BX26 1530 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 POLR3AO14802 1390 aaPredicted RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 UGGT1Q9NYU2 1555 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 FMN1Q68DA7 1419 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ATP10DQ9P241 1426 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 PPIAL4EA0A075B759 164 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 TRBV11-1A0A0K0K1C0 115 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 A0A1B0GTW7 788 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SMCO3A2RU48 225 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 NPEPPSL1A6NEC2 478 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 MANSC4A6NHS7 340 aaPredicted RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 E9PMD0 336 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 TMEM189-UBE2V1I3L0A0 370 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SGK494L7N484 410 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 M0R296 226 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 P2RY10O00398 339 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 FPGTO14772 594 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 RS1O15537 224 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 LDB3O75112 727 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SCGNO76038 276 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 TMCC1O94876 653 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ZFPL1O95159 310 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 GPANK1O95872 356 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 MT-ND2P03891 347 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 APRTP07741 180 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 PPIAL4FP0DN26 164 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 CD8BP10966 210 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 GP9P14770 177 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 NCK1P16333 377 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 GATA3P23771 443 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 IL12BP29460 328 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 CASP14P31944 242 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 MMP15P51511 669 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 NDST1P52848 882 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 PSMC5P62195 406 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 CYP4F2P78329 520 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 CDK16Q00536 496 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SIGLEC14Q08ET2 396 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 TMEM62Q0P6H9 643 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 NME3Q13232 169 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 PMS2P3Q13401 168 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 NFATC2Q13469 925 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 MFSD13AQ14CX5 517 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 HEPACAMQ14CZ8 416 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ETFDHQ16134 617 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 PSG3Q16557 428 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SYPL1Q16563 259 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 KYAT1Q16773 422 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ZNF528Q3MIS6 628 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 LINC01620Q4KN68 170 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 TREML2Q5T2D2 321 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 C6orf183Q5T699 404 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 DENND2CQ68D51 928 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 HIST2H2AA3Q6FI13 130 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 OR2A2Q6IF42 318 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 LCN10Q6JVE6 187 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 RGMBQ6NW40 437 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ZNF534Q76KX8 674 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SLC26A9Q7LBE3 791 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 CHSY1Q86X52 802 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 TGIF2LXQ8IUE1 241 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ADHFE1Q8IWW8 467 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.16□□□□□ -1.74
CD44-213ENST00000525209 RYBPQ8N488 228 aaPredicted RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 MAB21L3Q8N8X9 362 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SNX31Q8N9S9 440 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 KYQ8NBH2 561 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 COLGALT1Q8NBJ5 622 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SLC44A5Q8NCS7 719 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 FBXL13Q8NEE6 735 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 OR52N2Q8NGI0 321 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 OR52N4Q8NGI2 321 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 OR51L1Q8NGJ5 315 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 OR1L4Q8NGR5 311 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ING5Q8WYH8 240 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 MAP4K1Q92918 833 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 LHX4Q969G2 390 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 TMEM45BQ96B21 275 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 PPP1R14BQ96C90 147 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 ZNF274Q96GC6 653 aaPredicted RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 IGSF21Q96ID5 467 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SGK494Q96LW2 274 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 TGM7Q96PF1 710 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 MMS19Q96T76 1030 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SELENOSQ9BQE4 189 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 TRMT61BQ9BVS5 477 aaKnown RBP4.16□□□□□ -1.74
CD44-213ENST00000525209 GSDMCQ9BYG8 508 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 LRMDAQ9H2I8 198 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 SLA2Q9H6Q3 261 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 NARFLQ9H6Q4 476 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 UBTD1Q9HAC8 227 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 CCNB1IP1Q9NPC3 277 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
CD44-213ENST00000525209 C1RLQ9NZP8 487 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms