RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	PRSS51	A0A1B0GVH4	220 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356		A0A1W2PN81	502 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	OR52A4P	A6NMU1	304 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	ERI2	A8K979	691 aa	Known RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	WRB	O00258	174 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	SLC16A5	O15375	505 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	NVL	O15381	856 aa	Known RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CIDEA	O60543	219 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	DNAJB6	O75190	326 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	PDE9A	O76083	593 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	WNT1	P04628	370 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CHRNG	P07510	517 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	SAG	P10523	405 aa	Predicted RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	RALB	P11234	206 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CPA3	P15088	417 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	IL9	P15248	144 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CKMT2	P17540	419 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	TNNI3	P19429	210 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	S1PR1	P21453	382 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	MARCKS	P29966	332 aa	Predicted RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	PRDX2	P32119	198 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CHRNA7	P36544	502 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	DLST	P36957	453 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	USP8	P40818	1118 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	APOBEC1	P41238	236 aa	Known RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	ACLY	P53396	1101 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CCL23	P55773	120 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CLDN15	P56746	228 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CNTN2	Q02246	1040 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	TGM3	Q08188	693 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	SLC20A2	Q08357	652 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	PDK3	Q15120	406 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	NPTX1	Q15818	432 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	KIF19	Q2TAC6	998 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	ADPRM	Q3LIE5	342 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	C6orf10	Q5SRN2	563 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	ARMC12	Q5T9G4	340 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	ZDHHC20	Q5W0Z9	365 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	GGNBP1	Q5YKI7	109 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	AAGAB	Q6PD74	315 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	ZNF793	Q6ZN11	406 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	RBM44	Q6ZP01	1051 aa	Known RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	PAQR9	Q6ZVX9	377 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CENPQ	Q7L2Z9	268 aa	Predicted RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	BIVM	Q86UB2	503 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	SERINC5	Q86VE9	423 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	BEST3	Q8N1M1	668 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	SPEM1	Q8N4L4	309 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	AADAT	Q8N5Z0	425 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	ARL14EP	Q8N8R7	260 aa	Predicted RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	LRRC57	Q8N9N7	239 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	FAM47B	Q8NA70	645 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	SLC38A9	Q8NBW4	561 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	KLHDC9	Q8NEP7	349 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	PRSS33	Q8NF86	280 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	LMO3	Q8TAP4	145 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	SLC22A8	Q8TCC7	542 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	DNAJA4	Q8WW22	397 aa	Predicted RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	GGH	Q92820	318 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	MCHR2	Q969V1	340 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	RHBDF1	Q96CC6	855 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	LRRC39	Q96DD0	335 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	ZNF419	Q96HQ0	510 aa	Predicted RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	IFT74	Q96LB3	600 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	ZNF582	Q96NG8	517 aa	Predicted RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	FCRL5	Q96RD9	977 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	LZTS2	Q9BRK4	669 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	FTHL17	Q9BXU8	183 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CRNKL1	Q9BZJ0	848 aa	Known RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	MAGT1	Q9H0U3	335 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	SNX25	Q9H3E2	840 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	WDR76	Q9H967	626 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	PHPT1	Q9NRX4	125 aa	Predicted RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	GPR173	Q9NS66	373 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	FAM207A	Q9NSI2	230 aa	Predicted RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	GTSE1	Q9NYZ3	720 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	MRPS33	Q9Y291	106 aa	Known RBP	3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	GRIP1	Q9Y3R0	1128 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	KLK4	Q9Y5K2	254 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	SCN5A	Q14524	2016 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	CHD8	Q9HCK8	2581 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	TECTA	O75443	2155 aa		3.95	□□□□□ -1.78
PCM1-223	ENST00000524356	NCOR2	Q9Y618	2525 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	EP300	Q09472	2414 aa	Predicted RBP	3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	MYH3	P11055	1940 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	FAM186A	A6NE01	2351 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	HELT	A6NFD8	242 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356		H3BMM5	538 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	GOLGA8S	H3BPF8	625 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	STMND1	H3BQB6	276 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	ZNF254	O75437	659 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	ATP6AP2	O75787	350 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	NDUFB8	O95169	186 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	SNAI1	O95863	264 aa	Predicted RBP	3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	OTC	P00480	354 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	IGHV2-70	P01814	119 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	PROS1	P07225	676 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	CA3	P07451	260 aa		3.94	□□□□□ -1.78
PCM1-223	ENST00000524356	UMOD	P07911	640 aa		3.94	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms