RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TYROBPO43914 113 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 PVALBP20472 110 aaPredicted RBP15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 CD38P28907 300 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 CLDN8P56748 225 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 MALLQ13021 153 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 GRIN2CQ14957 1233 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 CTC1Q2NKJ3 1217 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 DEFB133Q30KQ1 61 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 PRAMEF17Q5VTA0 474 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 GTF2IRD2BQ6EKJ0 949 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 GTF2IRD2Q86UP8 949 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF761Q86XN6 746 aaPredicted RBP15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 LIX1LQ8IVB5 337 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 SERINC2Q96SA4 455 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 TMED9Q9BVK6 235 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 AIG1Q9NVV5 245 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 SDHDO14521 159 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 SEC14L5O43304 696 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 BRINP1O60477 761 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 PABPC4LP0CB38 370 aaKnown RBP15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 EMP2P54851 167 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 ACTC1P68032 377 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 ACTA1P68133 377 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 MFSD13AQ14CX5 517 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 GLT8D1Q68CQ7 371 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 PSD4Q8NDX1 1056 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 GRPEL2Q8TAA5 225 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 IL26Q9NPH9 171 aa15.52■□□□□ 0.07
PCDHA3-201ENST00000522353 A0A0J9YY10 115 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 NPIPB15A6NHN6 443 aaPredicted RBP15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 UNC119BA6NIH7 251 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 PLOD2O00469 737 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 LATO43561 262 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 OR1E2P47887 323 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 GNG2P59768 71 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 HERV-K104P61576 105 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 SEC23BQ15437 767 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 CNPY1Q3B7I2 92 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 SLC5A8Q8N695 610 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 NXPE3Q969Y0 559 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 NANSQ9NR45 359 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 STOX2Q9P2F5 926 aaPredicted RBP15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 C2orf92A0A1B0GVN3 265 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ADAMTS4O75173 837 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 CSN2P05814 226 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ATF6P18850 670 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ABRAXAS2Q15018 415 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 BTBD16Q32M84 506 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 CST9Q5W186 159 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF782Q6ZMW2 699 aaPredicted RBP15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ZER1Q7Z7L7 766 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 SLC15A3Q8IY34 581 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 NAXEQ8NCW5 288 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 OR14L1PQ8NHC6 308 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 TAMM41Q96BW9 452 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 PIP5K1AQ99755 562 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF576Q9H609 170 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 MEAF6Q9HAF1 191 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ACTR10Q9NZ32 417 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ARHGEF15O94989 841 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 HRGP04196 525 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 HOXD8P13378 290 aaPredicted RBP15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 KDELR2P33947 212 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ENTPD1P49961 510 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 MLLT1Q03111 559 aaPredicted RBP15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 PRKCDQ05655 676 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 PYHIN1Q6K0P9 492 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 TMEM151BQ8IW70 566 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 KRTCAP2Q8N6L1 136 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ZNF615Q8N8J6 731 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 OR51A7Q8NH64 312 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 DRGXA6NNA5 263 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 GGT2P36268 569 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 MECP2P51608 486 aaKnown RBP15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ECH1Q13011 328 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ODF4Q2M2E3 257 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 WSCD2Q2TBF2 565 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 DEFB110Q30KQ9 67 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 OR4N5Q8IXE1 308 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 FAM129BQ96TA1 746 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 ENY2Q9NPA8 101 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 FKBP14Q9NWM8 211 aa15.51■□□□□ 0.07
PCDHA3-201ENST00000522353 GRK5P34947 590 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 GRHL2Q6ISB3 625 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 CITED4Q96RK1 184 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 BOCQ9BWV1 1114 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 MYOCOSA0A1B0GUC4 107 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 GXYLT2A0PJZ3 443 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 A6NLC8 198 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 WASH4PA8MWX3 477 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 ERCC1P07992 297 aaPredicted RBP15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 GALK2Q01415 458 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 NADK2Q4G0N4 442 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 MARCH8Q5T0T0 291 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 PTCRAQ6ISU1 281 aaPredicted RBP15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 MSANTD1Q6ZTZ1 278 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 PDZD3Q86UT5 571 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 MAP3K3Q99759 626 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 DNAJC27Q9NZQ0 273 aa15.5■□□□□ 0.07
PCDHA3-201ENST00000522353 TMEM9Q9P0T7 183 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms