RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 IGSF5Q9NSI5 407 aa8.19□□□□□ -1.1
CTNNA1-229ENST00000521683 PSD3Q9NYI0 1048 aa8.19□□□□□ -1.1
CTNNA1-229ENST00000521683 GRHL1Q9NZI5 618 aa8.19□□□□□ -1.1
CTNNA1-229ENST00000521683 SPRR3Q9UBC9 169 aa8.19□□□□□ -1.1
CTNNA1-229ENST00000521683 CNOT11Q9UKZ1 510 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-229ENST00000521683 PCDHGA11Q9Y5H2 935 aa8.19□□□□□ -1.1
CTNNA1-229ENST00000521683 PRRC2AP48634 2157 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-229ENST00000521683 FLNAP21333 2647 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 A0A0A6YYD5 115 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 IQANK1A0A1B0GTG1 560 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 FAM221AA4D161 298 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 HSPB2A8KAH6 182 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 H0YIV9 168 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 HRKO00198 91 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 SAP18O00422 153 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 PROM1O43490 865 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 UGDHO60701 494 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 SH3BGRLO75368 114 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 CTAG2O75638 210 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 GPR75O95800 540 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 RFPL3SP0C7P2 107 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 NR2F6P10588 404 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 MTHFD2P13995 350 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 PTX3P26022 381 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 STX2P32856 288 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 DLX5P56178 289 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 SLC37A1P57057 533 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 HERVK_113P63132 956 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 ERVK-8P63133 956 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 CAV1Q03135 178 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 CUL3Q13618 768 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 DDX39BQ13838 428 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 SETDB1Q15047 1291 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 HSPB2Q16082 182 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 KBTBD12Q3ZCT8 623 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 C18orf63Q68DL7 685 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 METTL2BQ6P1Q9 378 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 ARSKQ6UWY0 536 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 RNF111Q6ZNA4 994 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 DGAT2L6Q6ZPD8 337 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 WDR53Q7Z5U6 358 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 CENPLQ8N0S6 344 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 TAGAPQ8N103 731 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 LIX1Q8N485 282 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 TEX9Q8N6V9 391 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 PPM1NQ8N819 430 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 ZNF441Q8N8Z8 693 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 OR10G3Q8NGC4 313 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 PPWD1Q96BP3 646 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 ZNF597Q96LX8 424 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 SECISBP2Q96T21 854 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 MTERF1Q99551 399 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 FOXC2Q99958 501 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 CNPPD1Q9BV87 410 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 SORBS1Q9BX66 1292 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 ERVK-6Q9BXR3 956 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 DDX31Q9H8H2 851 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 WDR41Q9HAD4 459 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 DNAJB12Q9NXW2 375 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 ERVK-19Q9WJR5 959 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 ASB4Q9Y574 426 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 IKBKGQ9Y6K9 419 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 ARHGAP21Q5T5U3 1957 aa8.18□□□□□ -1.1
CTNNA1-229ENST00000521683 NINQ8N4C6 2090 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 ABCA2Q9BZC7 2435 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 A0A087X1B8 175 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 CAPN14A8MX76 684 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 FOXE1O00358 373 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 SYT5O00445 386 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 TP53I11O14683 189 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 RAD51CO43502 376 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 TMPRSS11DO60235 418 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 OR10H2O60403 315 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 TRIM3O75382 744 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 PRKRAO75569 313 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 FAM155BO75949 473 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 SEMA3DO95025 777 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 CLPSP04118 112 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 FAM58BPP0C7Q3 252 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 SLC35E2P0CK97 266 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 BSGP35613 385 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 GMPRP36959 345 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 PIK3CGP48736 1102 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 TMED10P49755 219 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 ASCL1P50553 236 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 IST1P53990 364 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 RPS13P62277 151 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 MRPS25P82663 173 aaKnown RBP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 ZNF267Q14586 743 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 RPS6KA2Q15349 733 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 PCBP2Q15366 365 aaKnown RBP eCLIP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 FAM83EQ2M2I3 478 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 FBXL19-AS1Q494R0 122 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 ACSF3Q4G176 576 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 TMEM198Q66K66 360 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 OR52E8Q6IFG1 317 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 SEM1Q6ZVN7 128 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 NUDT13Q86X67 352 aa8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 MYLK4Q86YV6 388 aaPredicted RBP8.17□□□□□ -1.1
CTNNA1-229ENST00000521683 LACC1Q8IV20 430 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms