RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 RYDENQ9NUL5 291 aaKnown RBP18.11■□□□□ 0.49
PABPC1-215ENST00000520804 TNPO3Q9Y5L0 923 aaKnown RBP18.11■□□□□ 0.49
PABPC1-215ENST00000520804 POLQO75417 2590 aa18.11■□□□□ 0.49
PABPC1-215ENST00000520804 TRGV5A0A0B4J1U4 118 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 ESYT3A0FGR9 886 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 HCN1O60741 890 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 WDR1O75083 606 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 FBXO45P0C2W1 286 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 FAM58BPP0C7Q3 252 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 GLI4P10075 376 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 NR2F6P10588 404 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 PIK3CGP48736 1102 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 ZNF267Q14586 743 aaPredicted RBP18.1■□□□□ 0.49
PABPC1-215ENST00000520804 RTL6Q6ICC9 239 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 METTL2BQ6P1Q9 378 aaKnown RBP18.1■□□□□ 0.49
PABPC1-215ENST00000520804 KLC3Q6P597 504 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 CYP20A1Q6UW02 462 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 SYT10Q6XYQ8 523 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 RNF111Q6ZNA4 994 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 GOLGA7Q7Z5G4 137 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 FBXW8Q8N3Y1 598 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 OR10Q1Q8NGQ4 319 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 WDR20Q8TBZ3 569 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 RIT1Q92963 219 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 GAL3ST4Q96RP7 486 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 WWTR1Q9GZV5 400 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 ZNF703Q9H7S9 590 aaPredicted RBP18.1■□□□□ 0.49
PABPC1-215ENST00000520804 PROK2Q9HC23 129 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 ZFP64Q9NPA5 681 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 CNIH4Q9P003 139 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 ACAD8Q9UKU7 415 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 BOKQ9UMX3 212 aaPredicted RBP18.1■□□□□ 0.49
PABPC1-215ENST00000520804 RNF11Q9Y3C5 154 aa18.1■□□□□ 0.49
PABPC1-215ENST00000520804 GLOD5A6NK44 160 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 OR6C76A6NM76 312 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 FOXE1O00358 373 aaPredicted RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 SIX3O95343 332 aaPredicted RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 ALDOAP04075 364 aaKnown RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 HOXD4P09016 255 aaPredicted RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 ENDOUP21128 410 aaKnown RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 SERPINB3P29508 390 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 TYK2P29597 1187 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 GALNSP34059 522 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 SERPINB8P50452 374 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 NEK2P51955 445 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 SLC37A1P57057 533 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 KCNJ2P63252 427 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 SLC7A5Q01650 507 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 EBPQ15125 230 aaKnown RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 TESK1Q15569 626 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 UAP1Q16222 522 aaPredicted RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 WLSQ5T9L3 541 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 PRAMEF20Q5VT98 475 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 NUDT13Q86X67 352 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 C17orf53Q8N3J3 647 aaPredicted RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 OR10G3Q8NGC4 313 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 EXO5Q9H790 373 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 WDR41Q9HAD4 459 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 ZDHHC18Q9NUE0 388 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 CPSF2Q9P2I0 782 aaKnown RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 SPRR3Q9UBC9 169 aa18.09■□□□□ 0.49
PABPC1-215ENST00000520804 CHCHD2Q9Y6H1 151 aaPredicted RBP18.09■□□□□ 0.49
PABPC1-215ENST00000520804 A0A0G2JNJ9 132 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 LRRC3CA6NJW4 275 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 AIFM1O95831 613 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 CLPSP04118 112 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 RFPL3SP0C7P2 107 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 SLC35E2P0CK97 266 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 ZFP36L2P47974 494 aaKnown RBP18.08■□□□□ 0.48
PABPC1-215ENST00000520804 TECRLQ5HYJ1 363 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 C1orf185Q5T7R7 199 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 LRRC25Q8N386 305 aaPredicted RBP18.08■□□□□ 0.48
PABPC1-215ENST00000520804 FAM13CQ8NE31 585 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 UCN3Q969E3 161 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 VPS11Q9H270 941 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 Q9UFV3 132 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 KCNN3Q9UGI6 736 aa18.08■□□□□ 0.48
PABPC1-215ENST00000520804 CNOT11Q9UKZ1 510 aaKnown RBP18.08■□□□□ 0.48
PABPC1-215ENST00000520804 F8P00451 2351 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 OR7A17O14581 309 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 SEMA3DO95025 777 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 CLDN9O95484 217 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 PHBP35232 272 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 NTRK2Q16620 822 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 OR52E8Q6IFG1 317 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 PLD6Q8N2A8 252 aaKnown RBP18.07■□□□□ 0.48
PABPC1-215ENST00000520804 PTGR2Q8N8N7 351 aaPredicted RBP18.07■□□□□ 0.48
PABPC1-215ENST00000520804 ZNF441Q8N8Z8 693 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 CDK15Q96Q40 435 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 SERPINI1Q99574 410 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 ZNF559Q9BR84 538 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 NOL11Q9H8H0 719 aaKnown RBP18.07■□□□□ 0.48
PABPC1-215ENST00000520804 ACKR4Q9NPB9 350 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 QPCTLQ9NXS2 382 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 NCKAP5O14513 1909 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 INTS1Q8N201 2190 aaKnown RBP18.07■□□□□ 0.48
PABPC1-215ENST00000520804 CCDC168Q8NDH2 2452 aa18.07■□□□□ 0.48
PABPC1-215ENST00000520804 PGRMC2O15173 223 aa18.06■□□□□ 0.48
PABPC1-215ENST00000520804 GBAP04062 536 aa18.06■□□□□ 0.48
PABPC1-215ENST00000520804 GABRA1P14867 456 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms