RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 ADSLP30566 484 aaPredicted RBP14.34□□□□□ -0.11
LSM1-203ENST00000520755 FRKP42685 505 aaPredicted RBP14.34□□□□□ -0.11
LSM1-203ENST00000520755 POLR2JP52435 117 aaKnown RBP14.34□□□□□ -0.11
LSM1-203ENST00000520755 HSD17B7P56937 341 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 TERF2Q15554 542 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 TIGD2Q4W5G0 525 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 OR4F3Q6IEY1 312 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 TMEM205Q6UW68 189 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 KIRREL2Q6UWL6 708 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 GPR155Q7Z3F1 870 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 ANKRD37Q7Z713 158 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 GLB1L3Q8NCI6 653 aaPredicted RBP14.34□□□□□ -0.11
LSM1-203ENST00000520755 OR8J2Q8NGG1 315 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 SUN3Q8TAQ9 357 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 TANKQ92844 425 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 KLHL29Q96CT2 875 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 IP6K3Q96PC2 410 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 LRRC37BQ96QE4 947 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 PRORYQ9H606 182 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 WDR41Q9HAD4 459 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 TMEM45AQ9NWC5 275 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 C19orf25Q9UFG5 118 aaPredicted RBP14.34□□□□□ -0.11
LSM1-203ENST00000520755 MMACHCQ9Y4U1 282 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 LOC400499M0QZD8 3231 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 ZZEF1O43149 2961 aa14.34□□□□□ -0.11
LSM1-203ENST00000520755 MYOCOSA0A1B0GUC4 107 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 BLACEA4D250 179 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 MASP2O00187 686 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 CTNSO60931 367 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 ERAL1O75616 437 aaKnown RBP14.33□□□□□ -0.12
LSM1-203ENST00000520755 PPP2R1BP30154 601 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 PTGER1P34995 402 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 SOX18P35713 384 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 RPL3P39023 403 aaKnown RBP14.33□□□□□ -0.12
LSM1-203ENST00000520755 ACTN3Q08043 901 aaPredicted RBP14.33□□□□□ -0.12
LSM1-203ENST00000520755 CHAF1BQ13112 559 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 DPY19L1Q2PZI1 675 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 PGS1Q32NB8 556 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 CPTPQ5TA50 214 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 CPZQ66K79 652 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 R3HCC1LQ7Z5L2 792 aaKnown RBP14.33□□□□□ -0.12
LSM1-203ENST00000520755 CPEB2Q7Z5Q1 589 aaKnown RBP14.33□□□□□ -0.12
LSM1-203ENST00000520755 SNX32Q86XE0 403 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 POU5F2Q8N7G0 328 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 OR11G2Q8NGC1 345 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 SNRNP27Q8WVK2 155 aaKnown RBP14.33□□□□□ -0.12
LSM1-203ENST00000520755 VPS33AQ96AX1 596 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 NACC2Q96BF6 587 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 SPDL1Q96EA4 605 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 VPS50Q96JG6 964 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 ZBTB18Q99592 522 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 DUSP26Q9BV47 211 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 BHLHE41Q9C0J9 482 aaPredicted RBP14.33□□□□□ -0.12
LSM1-203ENST00000520755 SLC35C2Q9NQQ7 365 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 SH3BP4Q9P0V3 963 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 FBXL4Q9UKA2 621 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 MAPRE3Q9UPY8 281 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 ERVK-11Q9UQG0 969 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 USP24Q9UPU5 2620 aa14.33□□□□□ -0.12
LSM1-203ENST00000520755 MYO1GB0I1T2 1018 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 FBP2O00757 339 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 PCDH17O14917 1159 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 PDPK1O15530 556 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 SEC24DO94855 1032 aaPredicted RBP14.32□□□□□ -0.12
LSM1-203ENST00000520755 GPR75O95800 540 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 PGRP06401 933 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 COX6A1P12074 109 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 FEN1P39748 380 aaKnown RBP14.32□□□□□ -0.12
LSM1-203ENST00000520755 KIR3DL1P43629 444 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 OR4D2P58180 307 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 STX4Q12846 297 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 TLR1Q15399 786 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 SFT2D3Q587I9 215 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 C6orf89Q6UWU4 347 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 DGAT2L6Q6ZPD8 337 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 TRPM8Q7Z2W7 1104 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 RETREG3Q86VR2 466 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 ANKRD46Q86W74 232 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 CLECL1Q8IZS7 167 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 OR4K14Q8NGD5 310 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 TRIM4Q9C037 500 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 ZNF160Q9HCG1 818 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 SERHLQ9NQF3 203 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 MRGBPQ9NV56 204 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 ARL8BQ9NVJ2 186 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 EXPH5Q8NEV8 1989 aa14.32□□□□□ -0.12
LSM1-203ENST00000520755 LOC102723996A0A087X1L8 192 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 IGHV1-45A0A0A0MS14 117 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 NSG1A0A0A6YYJ2 146 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 TCRBV16S1A1N1A0A5B0 115 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 A8MUA0 341 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 IL6P05231 212 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 SNRPB2P08579 225 aaKnown RBP14.31□□□□□ -0.12
LSM1-203ENST00000520755 COX4I1P13073 169 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 CPMP14384 443 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 HOXB9P17482 250 aaPredicted RBP14.31□□□□□ -0.12
LSM1-203ENST00000520755 S100A3P33764 101 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 RRADP55042 308 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 KCNK10P57789 538 aa14.31□□□□□ -0.12
LSM1-203ENST00000520755 SRSF11Q05519 484 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms