RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 MPZL2O60487 215 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 JRKO75564 520 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 CDC123O75794 336 aaPredicted RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 TNFP01375 233 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 PVRP15151 417 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 PRPH2P23942 346 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 MC3RP41968 323 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 CLK3P49761 638 aaKnown RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 CRISP1P54107 249 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 ISL1P61371 349 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 MVKQ03426 396 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 UBXN2BQ14CS0 331 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 TMEM35AQ53FP2 167 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 USP30Q70CQ3 517 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 LAS2Q8IYD9 372 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 OR56A1Q8NGH5 318 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 OR9A2Q8NGT5 310 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 GPR174Q9BXC1 333 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 TMEM168Q9H0V1 697 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 ANKRA2Q9H9E1 313 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 NFKBIL1Q9UBC1 381 aaPredicted RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 WDR45Q9Y484 360 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 DNMT3AQ9Y6K1 912 aaPredicted RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 PTPRDP23468 1912 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 PRSS38A1L453 326 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 TMPRSS11DO60235 418 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 CLEC3AO75596 197 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 ARAFP10398 606 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 HIST1H1TP22492 207 aaPredicted RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 ALAS2P22557 587 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 VSX2P58304 361 aaPredicted RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 GABARAPL2P60520 117 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 HOXC5Q00444 222 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.63□□□□□ -0.87
MCF2-209ENST00000520602 CARTPTQ16568 116 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 TSTQ16762 297 aaKnown RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 PROX2Q3B8N5 592 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 ZNF829Q3KNS6 432 aaPredicted RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 EOGTQ5NDL2 527 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 TMEFF1Q8IYR6 380 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 IQCF1Q8N6M8 205 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 OR4K14Q8NGD5 310 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 OR52L1Q8NGH7 329 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 PIGXQ8TBF5 258 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 S100ZQ8WXG8 99 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 LGALS12Q96DT0 336 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 CDCA3Q99618 268 aaPredicted RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 EPYCQ99645 322 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 QRSL1Q9H0R6 528 aaKnown RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 KLHL31Q9H511 634 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 RLIMQ9NVW2 624 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 CALML5Q9NZT1 146 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 YBX2Q9Y2T7 364 aaKnown RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 PCDHGA2Q9Y5H1 932 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 CHD5Q8TDI0 1954 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 MICAL3Q7RTP6 2002 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 DUXAA6NLW8 204 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 FAM170BA6NMN3 283 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 HAT1O14929 419 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 RPLP0P05388 317 aaKnown RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 FHP07954 510 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 PSMA1P25786 263 aaKnown RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 PGDP52209 483 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 GINS1Q14691 196 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 MOGQ16653 247 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 AGBL4Q5VU57 503 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 C18orf63Q68DL7 685 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 FAM92BQ6ZTR7 304 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 UTS2BQ765I0 119 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 NRROSQ86YC3 692 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 PRSS58Q8IYP2 241 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 CADM2Q8N3J6 435 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 FCGR1BQ92637 280 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 NIPSNAP1Q9BPW8 284 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 KCNS3Q9BQ31 491 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 TREX2Q9BQ50 279 aaPredicted RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 WDR12Q9GZL7 423 aaKnown RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 IL21RQ9HBE5 538 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 SPHK1Q9NYA1 384 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 ANKMY1Q9P2S6 941 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 RNF6Q9Y252 685 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 KLHL33A6NCF5 533 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 UPK1AO00322 258 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 DLGAP1O14490 977 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 MAGEB3O15480 346 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 ACADLP28330 430 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 KEAP1Q14145 624 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 PTGES3Q15185 160 aaKnown RBP9.63□□□□□ -0.87
MCF2-209ENST00000520602 DEFB110Q30KQ9 67 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 NLRP8Q86W28 1048 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 CAMKK1Q8N5S9 505 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 OR2L5Q8NG80 312 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 ZNF675Q8TD23 568 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 HTRA1Q92743 480 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 RELTQ969Z4 430 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 PDXPQ96GD0 296 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 ST14Q9Y5Y6 855 aa9.63□□□□□ -0.87
MCF2-209ENST00000520602 PGRMC2O15173 223 aa9.62□□□□□ -0.87
MCF2-209ENST00000520602 GMFGO60234 142 aa9.62□□□□□ -0.87
MCF2-209ENST00000520602 B4GALT2O60909 372 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms