RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CNTN1Q12860 1018 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 NME3Q13232 169 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 DRP2Q13474 957 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 TMEM132DQ14C87 1099 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 HEPACAMQ14CZ8 416 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 EFTUD2Q15029 972 aaKnown RBP eCLIP3.52□□□□□ -1.85
SQLE-204ENST00000520493 TAB1Q15750 504 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 DUSP5Q16690 384 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ZSWIM7Q19AV6 140 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ANKRD55Q3KP44 614 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ADPRMQ3LIE5 342 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 GPAT3Q53EU6 434 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 MPPE1Q53F39 396 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 AGKQ53H12 422 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 BOLA3Q53S33 107 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 RFPL4BQ6ZWI9 263 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 VPS36Q86VN1 386 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ZDHHC21Q8IVQ6 265 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ZNF679Q8IYX0 411 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 GCNT2Q8N0V5 402 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ELMOD1Q8N336 334 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 GPRC5AQ8NFJ5 357 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 OR4L1Q8NH43 312 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 C8orf46Q8TAG6 207 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 CD99L2Q8TCZ2 262 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 RLN3Q8WXF3 142 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 CTNNBL1Q8WYA6 563 aaPredicted RBP3.52□□□□□ -1.85
SQLE-204ENST00000520493 TUBGCP3Q96CW5 907 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 SENP5Q96HI0 755 aaPredicted RBP3.52□□□□□ -1.85
SQLE-204ENST00000520493 ATP13A3Q9H7F0 1226 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 WDR76Q9H967 626 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 TM9SF3Q9HD45 589 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 FANCFQ9NPI8 374 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 RNF186Q9NXI6 227 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 SMPD3Q9NY59 655 aaPredicted RBP3.52□□□□□ -1.85
SQLE-204ENST00000520493 POLKQ9UBT6 870 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 BCAP29Q9UHQ4 241 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ZNF490Q9ULM2 529 aaPredicted RBP3.52□□□□□ -1.85
SQLE-204ENST00000520493 ASB3Q9Y575 518 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 ETV7Q9Y603 341 aa3.52□□□□□ -1.85
SQLE-204ENST00000520493 SYNRGQ9UMZ2 1314 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 IGHV4-4A0A075B6R2 117 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 A0A087WZ39 114 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 ZSCAN5CA6NGD5 496 aaPredicted RBP3.51□□□□□ -1.85
SQLE-204ENST00000520493 TCP10L2B9ZVM9 353 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 E9PMD0 336 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 SGK494L7N484 410 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 GPRIN2O60269 458 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 CEACAM4O75871 244 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 FGF19O95750 216 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 NGFP01138 241 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 IGLV1-44P01699 117 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 PRSS56P0CW18 603 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 CEBPBP17676 345 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 ACKR3P25106 362 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 GJB2P29033 226 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 AXLP30530 894 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 METAP1P53582 386 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 EXOSC7Q15024 291 aaKnown RBP3.51□□□□□ -1.85
SQLE-204ENST00000520493 POM121L1PQ3SYA9 428 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 FILIP1LQ4L180 1135 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 ATP1A1-AS1Q5TC04 95 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 C1orf189Q5VU69 101 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 NCR3LG1Q68D85 454 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 OR4C11Q6IEV9 310 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 BNIPLQ7Z465 357 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 MYPOPQ86VE0 399 aaPredicted RBP3.51□□□□□ -1.85
SQLE-204ENST00000520493 SLC22A16Q86VW1 577 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 ZC3H3Q8IXZ2 948 aaKnown RBP3.51□□□□□ -1.85
SQLE-204ENST00000520493 OR13C5Q8NGS8 318 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 GOLGA5Q8TBA6 731 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 GIPC3Q8TF64 312 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 PHYHIPQ92561 330 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 P3H4Q92791 437 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 SLC35C1Q96A29 364 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 TMEM45BQ96B21 275 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 BPIFA2Q96DR5 249 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 OMA1Q96E52 524 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 MRPL53Q96EL3 112 aaKnown RBP3.51□□□□□ -1.85
SQLE-204ENST00000520493 CCT7Q99832 543 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 AGPAT1Q99943 283 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 SLC26A1Q9H2B4 701 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 YAE1D1Q9NRH1 226 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 PLEK2Q9NYT0 353 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 RAI14Q9P0K7 980 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 C6orf203Q9P0P8 240 aaPredicted RBP3.51□□□□□ -1.85
SQLE-204ENST00000520493 DBF4Q9UBU7 674 aaPredicted RBP3.51□□□□□ -1.85
SQLE-204ENST00000520493 FOXJ3Q9UPW0 622 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 SMC3Q9UQE7 1217 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 FGD5Q6ZNL6 1462 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 PTPRUQ92729 1446 aa3.51□□□□□ -1.85
SQLE-204ENST00000520493 SF3B1O75533 1304 aaKnown RBP eCLIP3.5□□□□□ -1.85
SQLE-204ENST00000520493 IGKV3D-20A0A0C4DH25 116 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 TRBV4-1A0A0J9YWV2 114 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 IQCMA0A1B0GVH7 501 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 XPO1O14980 1071 aaKnown RBP3.5□□□□□ -1.85
SQLE-204ENST00000520493 P2RX6O15547 441 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 MTX2O75431 263 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 ZCCHC18P0CG32 403 aa3.5□□□□□ -1.85
SQLE-204ENST00000520493 CLUP10909 449 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms