RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 ENTPD4Q9Y227 616 aa13.56□□□□□ -0.24
TOP1MT-203ENST00000517857 ZNF780BQ9Y6R6 833 aa13.56□□□□□ -0.24
TOP1MT-203ENST00000517857 ZNF462Q96JM2 2506 aa13.56□□□□□ -0.24
TOP1MT-203ENST00000517857 CFAP46Q8IYW2 2715 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 PRKNO60260 465 aaPredicted RBP13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 DRD2P14416 443 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 PORP16435 677 aaPredicted RBP13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 PRPH2P23942 346 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 FEN1P39748 380 aaKnown RBP13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 SLC1A6P48664 564 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 TNFSF10P50591 281 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 GPR143P51810 404 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 MLF1P58340 268 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 C2orf80Q0P641 193 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 STX3Q13277 289 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 TUBA3CQ13748 450 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 PDCD2Q16342 344 aaPredicted RBP13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 SPRED3Q2MJR0 410 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 ZNF750Q32MQ0 723 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 PRR30Q53SZ7 412 aaPredicted RBP13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 CES4AQ5XG92 561 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 NOXRED1Q6NXP6 359 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 TUBA3EQ6PEY2 450 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 RNF111Q6ZNA4 994 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 RNF165Q6ZSG1 346 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 GALNT12Q8IXK2 581 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 OR6Y1Q8NGX8 325 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 FAM76AQ8TAV0 307 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 CPT1CQ8TCG5 803 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 ZNF721Q8TF20 911 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 SENP5Q96HI0 755 aaPredicted RBP13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 FBXL20Q96IG2 436 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 BRINP2Q9C0B6 783 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 SIRT5Q9NXA8 310 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 CCL27Q9Y4X3 112 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 PCDHGA10Q9Y5H3 936 aa13.55□□□□□ -0.24
TOP1MT-203ENST00000517857 J3QKU1 62 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 HRKO00198 91 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 ITGA10O75578 1167 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 CSNK2A2P19784 350 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 WDR4P57081 412 aaKnown RBP13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 RNF4P78317 190 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 OR1C1Q15619 314 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 INPP5JQ15735 1006 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 FAM180BQ6P0A1 224 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 Q6ZSR9 355 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 SLC29A4Q7RTT9 530 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 LRRC25Q8N386 305 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 CISD2Q8N5K1 135 aaKnown RBP13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 TMEM156Q8N614 296 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 HORMAD2Q8N7B1 307 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 ZNF781Q8N8C0 355 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 OR5L2Q8NGL0 311 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 C11orf24Q96F05 449 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 METTL2AQ96IZ6 378 aaKnown RBP13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 ATP6V1G3Q96LB4 118 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 PPP3R2Q96LZ3 170 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 C5orf34Q96MH7 638 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 GAL3ST4Q96RP7 486 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 ZNF395Q9H8N7 513 aaPredicted RBP13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 VIPAS39Q9H9C1 493 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 LIN28AQ9H9Z2 209 aaKnown RBP13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 MYNNQ9NPC7 610 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 GIMAP2Q9UG22 337 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 CES1P1Q9UKY3 287 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 RAP2CQ9Y3L5 183 aa13.54□□□□□ -0.24
TOP1MT-203ENST00000517857 BSNQ9UPA5 3926 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 ATP6AP2A0A1C7CYW4 349 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 WWP2O00308 870 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 LSM1O15116 133 aaKnown RBP13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 PRAMEF2O60811 474 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 PEX11AO75192 247 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 ATP6AP2O75787 350 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 MAPK1P28482 360 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 GALNSP34059 522 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 PTGER1P34995 402 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 CD96P40200 585 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 CYB561P49447 251 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 SSR4P51571 173 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 HK2P52789 917 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 SLC18A1P54219 525 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 BST1Q10588 318 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 UGT3A2Q3SY77 523 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 ATP6AP1LQ52LC2 224 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 TTMPQ5BVD1 217 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 ZNF766Q5HY98 468 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 C16orf47Q6ZP98 133 aaPredicted RBP13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 TRIM42Q8IWZ5 723 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 KIRREL3Q8IZU9 778 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 ASB15Q8WXK1 588 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 TUBGCP3Q96CW5 907 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 C19orf60Q96EN9 201 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 CNRIP1Q96F85 164 aaPredicted RBP13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 PPP1R36Q96LQ0 422 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 TSSK3Q96PN8 268 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 SIGLEC12Q96PQ1 595 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 CCT7Q99832 543 aa13.53□□□□□ -0.24
TOP1MT-203ENST00000517857 CXorf21Q9HAI6 301 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms