RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 CPN2P22792 545 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 SLC6A12P48065 614 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 PCYT1AP49585 367 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 TMED10P49755 219 aaKnown RBP10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 RPP38P78345 283 aaKnown RBP10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 ID2Q02363 134 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 CBLBQ13191 982 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 GAB1Q13480 694 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 TOMM20Q15388 145 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 ACKR1Q16570 336 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 SPANXN3Q5MJ09 141 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 RNF111Q6ZNA4 994 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 FRA10AC1Q70Z53 315 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 VN1R5Q7Z5H4 357 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 ADAMTSL2Q86TH1 951 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 TMEM139Q8IV31 216 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 AGGF1Q8N302 714 aaeCLIP10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 NKAPQ8N5F7 415 aaKnown RBP10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 ACOT4Q8N9L9 421 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 C9orf106Q8NAJ2 232 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 BBOF1Q8ND07 529 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 ABTB1Q969K4 478 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 ANKRD9Q96BM1 317 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 RILPQ96NA2 401 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 MAPKAP1Q9BPZ7 522 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 PELOQ9BRX2 385 aaKnown RBP10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 NAT9Q9BTE0 207 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 GSX2Q9BZM3 304 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 WWTR1Q9GZV5 400 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 UBTD1Q9HAC8 227 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 MS4A12Q9NXJ0 267 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 GUCA1BQ9UMX6 200 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 SLC6A5Q9Y345 797 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 OARD1Q9Y530 152 aa10.47□□□□□ -0.73
TRAPPC9-203ENST00000517667 RAI1Q7Z5J4 1906 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 NPEPPSL1A6NEC2 478 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 RNF212BA8MTL3 300 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 KIF2AO00139 706 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 CLGNO14967 610 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 CTIFO43310 598 aaKnown RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 FGF17O60258 216 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 ZNF500O60304 480 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 CDH16O75309 829 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 SCELO95171 688 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 RCBTB2O95199 551 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 ACSL3O95573 720 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 CNOT4O95628 575 aaKnown RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 ATP5A1P25705 553 aaKnown RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 CPOXP36551 454 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 MC3RP41968 323 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 FOXF2Q12947 444 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 LAPTM5Q13571 262 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 EBPQ15125 230 aaKnown RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 KCTD19Q17RG1 926 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 SPRED3Q2MJR0 410 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 TMEM35AQ53FP2 167 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 DCST1Q5T197 706 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 ST13P4Q8IZP2 240 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 UCN3Q969E3 161 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 PTCD3Q96EY7 689 aaKnown RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 CERS2Q96G23 380 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 F2RL3Q96RI0 385 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 EFCAB11Q9BUY7 163 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 ANGPTL4Q9BY76 406 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 CNOT10Q9H9A5 744 aaKnown RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 PPANQ9NQ55 473 aaKnown RBP10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 SNX15Q9NRS6 342 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 FETUBQ9UGM5 382 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 PACSIN3Q9UKS6 424 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 IKZF3Q9UKT9 509 aa10.46□□□□□ -0.73
TRAPPC9-203ENST00000517667 DSCAMO60469 2012 aa10.46□□□□□ -0.74
TRAPPC9-203ENST00000517667 A8MXE2 369 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 HRKO00198 91 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 CDC7O00311 574 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 C8BP07358 591 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 CPN1P15169 458 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 ALOX15P16050 662 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 HIST1H1TP22492 207 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 CHMP24386 653 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 TLX1P31314 330 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 GDF5P43026 501 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 SSR2P43308 183 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 PGGT1BP53609 377 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 NRG3P56975 720 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 SLC37A1P57057 533 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 HERVK_113P63132 956 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 ERVK-8P63133 956 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 HIST2H2ACQ16777 129 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 AP5B1Q2VPB7 878 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 PAGE2BQ5JRK9 111 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 HIST2H2AA3Q6FI13 130 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 PODNL1Q6PEZ8 512 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 ZNF793Q6ZN11 406 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 PPIL6Q8IXY8 311 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 TCAIMQ8N3R3 496 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 ZNF441Q8N8Z8 693 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 NAT8LQ8N9F0 302 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 SPPL2AQ8TCT8 520 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 TANKQ92844 425 aa10.45□□□□□ -0.74
TRAPPC9-203ENST00000517667 WNT2BQ93097 391 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms