RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PAQR5Q9NXK6 330 aaPredicted RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 IL17CQ9P0M4 197 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 ACSL6Q9UKU0 697 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 DOCK1Q14185 1865 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CAPN5O15484 640 aaPredicted RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 APOL3O95236 402 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 KLF8O95600 359 aaPredicted RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 IGLV3-25P01717 112 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 IFNA6P05013 189 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 SRCP12931 536 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CCKBRP32239 447 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CASP3P42574 277 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 FCHO2Q0JRZ9 810 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 E2F2Q14209 437 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 PTGES3Q15185 160 aaKnown RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CTF1Q16619 201 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 LIPJQ5W064 366 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 SYCE2Q6PIF2 218 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 TMEM179BQ7Z7N9 219 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC22A15Q8IZD6 547 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 METTL4Q8N3J2 472 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 TRAM1L1Q8N609 369 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC5A8Q8N695 610 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 METTL27Q8N6F8 245 aaPredicted RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 MYLIPQ8WY64 445 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 MAL2Q969L2 176 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 GSDMCQ9BYG8 508 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 ACPTQ9BZG2 426 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 OR1A2Q9Y585 309 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 COL11A1P12107 1806 aaPredicted RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 FEZF1A0PJY2 475 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 DRGXA6NNA5 263 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 PSMD9O00233 223 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 HMGN1P05114 100 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CKMT1AP12532 417 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 TNFRSF1BP20333 461 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC6A4P31645 630 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 ENPP2Q13822 863 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 NFE2L1Q14494 772 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 SMU1Q2TAY7 513 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 AKIRIN2Q53H80 203 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 PRRT3Q5FWE3 981 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 BICRALQ6AI39 1079 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 SPATC1Q76KD6 591 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 DGAT2Q96PD7 388 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 P2RY13Q9BPV8 354 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 IKZF5Q9H5V7 419 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 ANKRA2Q9H9E1 313 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 NPIPB15A6NHN6 443 aaPredicted RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 M0R129 80 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CDRT1O95170 752 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 DBIP07108 87 aaKnown RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 CD9P21926 228 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 ACVR2AP27037 513 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 MLLT3P42568 568 aaPredicted RBP10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 ARFIP1P53367 373 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 AFMIDQ63HM1 303 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 HUS1BQ8NHY5 278 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 LMX1AQ8TE12 382 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 UBE2FQ969M7 185 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 FAM129BQ96TA1 746 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 DPH7Q9BTV6 452 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 HCN4Q9Y3Q4 1203 aa10.35□□□□□ -0.75
PCDHGA1-202ENST00000517417 BRCA1P38398 1863 aaKnown RBP10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC35F4A4IF30 521 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 RPP14O95059 124 aaKnown RBP10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 PSKH1P11801 424 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 C6P13671 934 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 ZNF823P16415 610 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 SDC1P18827 310 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 CA5AP35218 305 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 DNASE1L1P49184 302 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 ACVR1Q04771 509 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 ST3GAL3Q11203 375 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 NKG7Q16617 165 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 GTF2IRD2BQ6EKJ0 949 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 GTF2IRD2Q86UP8 949 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC30A8Q8IWU4 369 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 NATD1Q8N6N6 113 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 FIBINQ8TAL6 211 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 MAPKAP1Q9BPZ7 522 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 OR8D2Q9GZM6 311 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 IL21RQ9HBE5 538 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 FBXO8Q9NRD0 319 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 ZNF639Q9UID6 485 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 OR12D1P0DN82 309 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 EIF2DP41214 584 aaKnown RBP10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 MLLT10P55197 1068 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 SLC35A2P78381 396 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 ABATP80404 500 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 DEFB103AP81534 67 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 NNATQ16517 81 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 OLFML2AQ68BL7 652 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 SMARCD2Q92925 531 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 EGLN2Q96KS0 407 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 ZSWIM3Q96MP5 696 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 BARD1Q99728 777 aaKnown RBP10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 RC3H2Q9HBD1 1191 aaKnown RBP10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 TNFRSF10DQ9UBN6 386 aa10.34□□□□□ -0.75
PCDHGA1-202ENST00000517417 ACSL5Q9ULC5 683 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms