RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 ACY1Q03154 408 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 EEF1A2Q05639 463 aaKnown RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 CRELD2Q6UXH1 353 aaPredicted RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 YTHDF3Q7Z739 585 aaKnown RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 ZNF584Q8IVC4 421 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 LSM14AQ8ND56 463 aaKnown RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 OR52P1PQ8NH57 321 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 C9orf43Q8TAL5 461 aaPredicted RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 BBS10Q8TAM1 723 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 C15orf40Q8WUR7 153 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 METTL2AQ96IZ6 378 aaKnown RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 TREX2Q9BQ50 279 aaPredicted RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 KATNBL1Q9H079 304 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 GPRC5BQ9NZH0 403 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 MYEF2Q9P2K5 600 aaKnown RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 SALL4Q9UJQ4 1053 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 A0A1W2PPW3 197 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 C2orf72A6NCS6 295 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 CD40LGP29965 261 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 ANKDD1AQ495B1 522 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 BCL2L15Q5TBC7 163 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 KRTCAP2Q8N6L1 136 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 CANT1Q8WVQ1 401 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 TOE1Q96GM8 510 aaKnown RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 PAAF1Q9BRP4 392 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 CADM1Q9BY67 442 aaKnown RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 DKK3Q9UBP4 350 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 IGKV6D-41A0A0C4DH26 115 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 AFF1P51825 1210 aaKnown RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 LIPJQ5W064 366 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 RABEPKQ7Z6M1 372 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 OR9I1Q8NGQ6 314 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 GATAD2BQ8WXI9 593 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 OR5P2Q8WZ92 322 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 VDAC3Q9Y277 283 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 ADGRB2O60241 1585 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 KIAA1210Q9ULL0 1709 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 A0A0A6YYH2 397 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 LCHNA4D1U4 455 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 A6NJ64 397 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 RRP8O43159 456 aaKnown RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 DIRAS3O95661 229 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 LPLP06858 475 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 ADRB3P13945 408 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 DRD1P21728 446 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 TAS2R43P59537 309 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 GALNT1Q10472 559 aaPredicted RBP10.54□□□□□ -0.72
TRIM41-209ENST00000515834 ZDHHC14Q8IZN3 488 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 NPRL2Q8WTW4 380 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 FCAMRQ8WWV6 532 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 ITPAQ9BY32 194 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 B3GALT1Q9Y5Z6 326 aa10.54□□□□□ -0.72
TRIM41-209ENST00000515834 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.53□□□□□ -0.72
TRIM41-209ENST00000515834 TRAV6A0A075B6T7 132 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 MDFIC2A0A1B0GVS7 189 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 C1orf226A1L170 272 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 HRH2P25021 359 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 GALNT2Q10471 571 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 PAFAH1B3Q15102 231 aaKnown RBP10.53□□□□□ -0.72
TRIM41-209ENST00000515834 FAM180BQ6P0A1 224 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 AP1S3Q96PC3 154 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
TRIM41-209ENST00000515834 RXFP3Q9NSD7 469 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 GJD2Q9UKL4 321 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 AP1M2Q9Y6Q5 423 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 B8ZZF3 427 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 FLRT2O43155 660 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 LCATP04180 440 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 HLA-DPB1P04440 258 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 KIAA1191Q96A73 305 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 HCFC1R1Q9NWW0 138 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 PCDH10Q9P2E7 1040 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 UBE2J1Q9Y385 318 aaPredicted RBP10.53□□□□□ -0.72
TRIM41-209ENST00000515834 ZNF840PA6NDX5 716 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 OR6C70A6NIJ9 312 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 HHLA1C9JL84 531 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 STC2O76061 302 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 IFNA5P01569 189 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 CKMT2P17540 419 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 ENDOUP21128 410 aaKnown RBP10.53□□□□□ -0.72
TRIM41-209ENST00000515834 ARSFP54793 590 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 ZNF33BQ06732 778 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 ESCO2Q56NI9 601 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 RTP2Q5QGT7 225 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 TMEM69Q5SWH9 247 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 PLEKHG7Q6ZR37 379 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 COMTD1Q86VU5 262 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 STOML3Q8TAV4 291 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 LRIG1Q96JA1 1093 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 ZBTB26Q9HCK0 441 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 NANSQ9NR45 359 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 PCDHGA8Q9Y5G5 932 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 PLSCR5A0PG75 271 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 MAS1P04201 325 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 CEBPBP17676 345 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 CD70P32970 193 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 GINS1Q14691 196 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 MFSD13AQ14CX5 517 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 SLC5A8Q8N695 610 aa10.53□□□□□ -0.72
TRIM41-209ENST00000515834 LRRC57Q8N9N7 239 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms