RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 VPS50Q96JG6 964 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 AMDHD1Q96NU7 426 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 IP6K3Q96PC2 410 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 DGAT2Q96PD7 388 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 CCDC106Q9BWC9 280 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 SLAMF7Q9NQ25 335 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 ARMCX1Q9P291 453 aa19.64■□□□□ 0.73
LSM6-207ENST00000515311 NR5A2O00482 541 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 RNASET2O00584 256 aaKnown RBP19.63■□□□□ 0.73
LSM6-207ENST00000515311 KLK10O43240 276 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 IFNA16P05015 189 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 OTX2P32243 289 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 DGKQP52824 942 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 WNT3P56703 355 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 OR4D2P58180 307 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 PHC1P78364 1004 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 DUSP2Q05923 314 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 MAPRE2Q15555 327 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 CRTC2Q53ET0 693 aaPredicted RBP19.63■□□□□ 0.73
LSM6-207ENST00000515311 OR4F3Q6IEY1 312 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 CPEB2Q7Z5Q1 589 aaKnown RBP19.63■□□□□ 0.73
LSM6-207ENST00000515311 ADAMTS17Q8TE56 1095 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 SPDL1Q96EA4 605 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 OR52E6Q96RD3 313 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 CCNL2Q96S94 520 aaPredicted RBP19.63■□□□□ 0.73
LSM6-207ENST00000515311 SLC52A3Q9NQ40 469 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 ACACAQ13085 2346 aa19.63■□□□□ 0.73
LSM6-207ENST00000515311 PRSS51A0A1B0GVH4 220 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 SOCS6O14544 535 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 CFLARO15519 480 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 SCN2BO60939 215 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 SLITRK5O94991 958 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 NCBP2P52298 156 aaKnown RBP eCLIP19.62■□□□□ 0.73
LSM6-207ENST00000515311 SPRED3Q2MJR0 410 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 TIGD2Q4W5G0 525 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 SFT2D3Q587I9 215 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 FAM91A1Q658Y4 838 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 KIRREL2Q6UWL6 708 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 MRGPREQ86SM8 312 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 CCDC116Q8IYX3 515 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 OR5P2Q8WZ92 322 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 ZNF700Q9H0M5 742 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 GLIPR2Q9H4G4 154 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 PNO1Q9NRX1 252 aaKnown RBP19.62■□□□□ 0.73
LSM6-207ENST00000515311 WDR70Q9NW82 654 aa19.62■□□□□ 0.73
LSM6-207ENST00000515311 IGF2RP11717 2491 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 MYOCOSA0A1B0GUC4 107 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 A0A1W2PP18 115 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 A0A1W2PRB8 838 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 TMEM8BA6NDV4 472 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 CCDC154A6NI56 674 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 C1QTNF9BB2RNN3 333 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 RRP8O43159 456 aaKnown RBP19.61■□□□□ 0.73
LSM6-207ENST00000515311 SNRPB2P08579 225 aaKnown RBP19.61■□□□□ 0.73
LSM6-207ENST00000515311 IFI6P09912 130 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 C1QTNF9P0C862 333 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 CAPN3P20807 821 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 MANFP55145 182 aaKnown RBP19.61■□□□□ 0.73
LSM6-207ENST00000515311 GK5Q6ZS86 529 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 OR11G2Q8NGC1 345 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 OR14A16Q8NHC5 309 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 PSMA8Q8TAA3 256 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 ZNF675Q8TD23 568 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 PTPMT1Q8WUK0 201 aaPredicted RBP19.61■□□□□ 0.73
LSM6-207ENST00000515311 RIT1Q92963 219 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 VPS33AQ96AX1 596 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 PPWD1Q96BP3 646 aaKnown RBP19.61■□□□□ 0.73
LSM6-207ENST00000515311 CCDC115Q96NT0 180 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 WDR77Q9BQA1 342 aaPredicted RBP19.61■□□□□ 0.73
LSM6-207ENST00000515311 MESP1Q9BRJ9 268 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 SLC25A23Q9BV35 468 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 RMND5AQ9H871 391 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 CXorf21Q9HAI6 301 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 NEUROD4Q9HD90 331 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 BTNL2Q9UIR0 455 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 CLCA3PQ9Y6N3 262 aa19.61■□□□□ 0.73
LSM6-207ENST00000515311 IGHV1-45A0A0A0MS14 117 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 ZNF891A8MT65 544 aaPredicted RBP19.6■□□□□ 0.73
LSM6-207ENST00000515311 CAPN14A8MX76 684 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 C17orf105B2RV13 164 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 DYRK3O43781 588 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 COX6A1P12074 109 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 WT1P19544 449 aaPredicted RBP19.6■□□□□ 0.73
LSM6-207ENST00000515311 NT5EP21589 574 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 MAP4K2Q12851 820 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 SRSF6Q13247 344 aaKnown RBP19.6■□□□□ 0.73
LSM6-207ENST00000515311 PRICKLE4Q2TBC4 344 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 C6orf163Q5TEZ5 329 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 ZNF551Q7Z340 670 aaPredicted RBP19.6■□□□□ 0.73
LSM6-207ENST00000515311 SPACA3Q8IXA5 215 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 GALNT12Q8IXK2 581 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 OR9A2Q8NGT5 310 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 DAZLQ92904 295 aaKnown RBP19.6■□□□□ 0.73
LSM6-207ENST00000515311 C8orf44Q96CB5 159 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 ERP27Q96DN0 273 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 LPAR4Q99677 370 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 CHD8Q9HCK8 2581 aa19.6■□□□□ 0.73
LSM6-207ENST00000515311 ASPDHA6ND91 283 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 SAGE2PA6NJ88 616 aa19.59■□□□□ 0.73
LSM6-207ENST00000515311 PEX12O00623 359 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms