RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 HNRNPCL2B2RXH8 293 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 HNRNPCL3B7ZW38 293 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 J3QRK9 145 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 FFAR1O14842 300 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 B4GALT2O60909 372 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 RPLP0P05388 317 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 HNRNPCL4P0DMR1 293 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 HIST1H1TP22492 207 aaPredicted RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 ATP5A1P25705 553 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 ELAVL4P26378 380 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 NTSR1P30989 418 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 IGFALSP35858 605 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 BCL6P41182 706 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 NCBP2P52298 156 aaKnown RBP eCLIP14.05□□□□□ -0.16
NUP54-217ENST00000514987 STXBP1P61764 594 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 ALDH6A1Q02252 535 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 ST3GAL4Q11206 333 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 SFSWAPQ12872 951 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 COX10Q12887 443 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 SLAMF1Q13291 335 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 ITGADQ13349 1161 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 MAPK11Q15759 364 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 ATAT1Q5SQI0 421 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 MEDAGQ5VYS4 303 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 SLX4IPQ5VYV7 408 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 ABHD17CQ6PCB6 329 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 SLC46A3Q7Z3Q1 461 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 MFSD9Q8NBP5 474 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 ST13P5Q8NFI4 369 aaPredicted RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 OR2L3Q8NG85 312 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 OR14C36Q8NHC7 312 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 KXD1Q9BQD3 176 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 MMP27Q9H306 513 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 IGFLR1Q9H665 355 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 LYARQ9NX58 379 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 MS4A12Q9NXJ0 267 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 TRPC4Q9UBN4 977 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 PNMA8BQ9ULN7 279 aaPredicted RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 ENTPD4Q9Y227 616 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 ASB4Q9Y574 426 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 CORINQ9Y5Q5 1042 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 A0A1W2PRQ8 180 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 ANTXRLA6NF34 631 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 K7EQS6 105 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 M0R082 166 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 CASC3O15234 703 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 ERI3O43414 337 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 UGT2B17O75795 530 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 FHP07954 510 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 STSP08842 583 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 OR12D1P0DN82 309 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 POU2F1P14859 743 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 CSNK2A2P19784 350 aaPredicted RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 C21orf33P30042 268 aaPredicted RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 KIAA1024LP59773 190 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 NCS1P62166 190 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 LSM3P62310 102 aaKnown RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 LRRC32Q14392 662 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 TIMM50Q3ZCQ8 353 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 TMEM201Q5SNT2 666 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 FAM109BQ6ICB4 259 aaPredicted RBP14.05□□□□□ -0.16
NUP54-217ENST00000514987 ANKRD54Q6NXT1 300 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 FAM180BQ6P0A1 224 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 TUBA3EQ6PEY2 450 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 CD300LDQ6UXZ3 194 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 WASH2PQ6VEQ5 465 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 ZNF793Q6ZN11 406 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 GJD3Q8N144 294 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 CENPSQ8N2Z9 138 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 AMER2Q8N7J2 671 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 ACOT4Q8N9L9 421 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 B3GNT7Q8NFL0 401 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 XAGE5Q8WWM1 108 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 KLK6Q92876 244 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 DACH2Q96NX9 599 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 MYADMQ96S97 322 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 NRTNQ99748 197 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 GABRG3Q99928 467 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 DCSTAMPQ9H295 470 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 C3orf14Q9HBI5 128 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 SLC6A20Q9NP91 592 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 PRDM7Q9NQW5 492 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 GIN1Q9NXP7 522 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 GPR83Q9NYM4 423 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 OR6C2Q9NZP2 312 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 CALML5Q9NZT1 146 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 C5AR2Q9P296 337 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 RHCGQ9UBD6 479 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 MOSPD1Q9UJG1 213 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.05□□□□□ -0.16
NUP54-217ENST00000514987 KLK4Q9Y5K2 254 aa14.05□□□□□ -0.16
NUP54-217ENST00000514987 TRBV4-1A0A0J9YWV2 114 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 TLR4O00206 839 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 ADORA3P0DMS8 318 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 LAMP2P13473 410 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 MPIP34949 423 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 CNR2P34972 360 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 IDUAP35475 653 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 TIE1P35590 1138 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 LIPAP38571 399 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms