RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 ERVK-8P63133 956 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 RNF4P78317 190 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 OC90Q02509 493 aaPredicted RBP11.53□□□□□ -0.56
COPB2-212ENST00000514508 TUBA3CQ13748 450 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 ZNF267Q14586 743 aaPredicted RBP11.53□□□□□ -0.56
COPB2-212ENST00000514508 KIAA0040Q15053 153 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 NR6A1Q15406 480 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 C6orf163Q5TEZ5 329 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 NOXRED1Q6NXP6 359 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 TUBA3EQ6PEY2 450 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 DGAT2L6Q6ZPD8 337 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 GALNT12Q8IXK2 581 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 DDIASQ8IXT1 998 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 SAMD14Q8IZD0 417 aaPredicted RBP11.53□□□□□ -0.56
COPB2-212ENST00000514508 KIRREL3Q8IZU9 778 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 HORMAD2Q8N7B1 307 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 ZNF321PQ8N8H1 164 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 ANKRD42Q8N9B4 389 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 AGR3Q8TD06 166 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 THAP3Q8WTV1 239 aaPredicted RBP11.53□□□□□ -0.56
COPB2-212ENST00000514508 KLHL29Q96CT2 875 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 PAIP2Q9BPZ3 127 aaKnown RBP11.53□□□□□ -0.56
COPB2-212ENST00000514508 CNPPD1Q9BV87 410 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 EBPLQ9BY08 206 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 TRIM4Q9C037 500 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 VIPAS39Q9H9C1 493 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 CXorf21Q9HAI6 301 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 LRTM1Q9HBL6 345 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 NKIRAS1Q9NYS0 192 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 EHD3Q9NZN3 535 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 LRFN1Q9P244 771 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 MYOTQ9UBF9 498 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 ZDHHC2Q9UIJ5 367 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 UTS2RQ9UKP6 389 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 ERVK-19Q9WJR5 959 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.53□□□□□ -0.56
COPB2-212ENST00000514508 YARS2Q9Y2Z4 477 aaKnown RBP11.53□□□□□ -0.56
COPB2-212ENST00000514508 POLR3HQ9Y535 204 aaPredicted RBP11.53□□□□□ -0.56
COPB2-212ENST00000514508 PCDHGB6Q9Y5F9 930 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 PTGDR2Q9Y5Y4 395 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 ZNF780BQ9Y6R6 833 aa11.53□□□□□ -0.56
COPB2-212ENST00000514508 FASNP49327 2511 aaKnown RBP11.52□□□□□ -0.56
COPB2-212ENST00000514508 A0A1W2PS29 197 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 PIP5K1BO14986 540 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 PRKNO60260 465 aaPredicted RBP11.52□□□□□ -0.57
COPB2-212ENST00000514508 PRAMEF2O60811 474 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 ITGA10O75578 1167 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 ATP1B1P05026 303 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 LINC00032P0C843 101 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 CD46P15529 392 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 NT5EP21589 574 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 BGNP21810 368 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 SLC1A6P48664 564 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 HLCSP50747 726 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 WDR4P57081 412 aaKnown RBP11.52□□□□□ -0.57
COPB2-212ENST00000514508 FOXK1P85037 733 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 C2orf80Q0P641 193 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 STX3Q13277 289 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 OR1C1Q15619 314 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 INAQ16352 499 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 RNF111Q6ZNA4 994 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 IKBIPQ70UQ0 350 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 ATCAYQ86WG3 371 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 MMP21Q8N119 569 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 CISD2Q8N5K1 135 aaKnown RBP11.52□□□□□ -0.57
COPB2-212ENST00000514508 TMEM156Q8N614 296 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 MDS2Q8NDY4 140 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 OR2T11Q8NH01 316 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 NUBPLQ8TB37 319 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.52□□□□□ -0.57
COPB2-212ENST00000514508 MIB2Q96AX9 1013 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 SNRNP40Q96DI7 357 aaKnown RBP11.52□□□□□ -0.57
COPB2-212ENST00000514508 CNRIP1Q96F85 164 aaPredicted RBP11.52□□□□□ -0.57
COPB2-212ENST00000514508 FCRL1Q96LA6 429 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 TRIM45Q9H8W5 580 aaPredicted RBP11.52□□□□□ -0.57
COPB2-212ENST00000514508 MYNNQ9NPC7 610 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 RYDENQ9NUL5 291 aaKnown RBP11.52□□□□□ -0.57
COPB2-212ENST00000514508 GIMAP4Q9NUV9 329 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 ANKRD10Q9NXR5 420 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 TMED5Q9Y3A6 229 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 RAP2CQ9Y3L5 183 aa11.52□□□□□ -0.57
COPB2-212ENST00000514508 COPG1Q9Y678 874 aaKnown RBP11.52□□□□□ -0.57
COPB2-212ENST00000514508 TMEM200CA6NKL6 621 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 OR6C76A6NM76 312 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 HRKO00198 91 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 LSM1O15116 133 aaKnown RBP11.51□□□□□ -0.57
COPB2-212ENST00000514508 ITM2AO43736 263 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 LYPLA1O75608 230 aaPredicted RBP11.51□□□□□ -0.57
COPB2-212ENST00000514508 DDCP20711 480 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 FEN1P39748 380 aaKnown RBP11.51□□□□□ -0.57
COPB2-212ENST00000514508 SSR4P51571 173 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 HK2P52789 917 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 RPL38P63173 70 aaKnown RBP11.51□□□□□ -0.57
COPB2-212ENST00000514508 FUT7Q11130 342 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 MPEG1Q2M385 716 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 PRR30Q53SZ7 412 aaPredicted RBP11.51□□□□□ -0.57
COPB2-212ENST00000514508 XKR7Q5GH72 579 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 ZNF766Q5HY98 468 aa11.51□□□□□ -0.57
COPB2-212ENST00000514508 ZNF468Q5VIY5 522 aaPredicted RBP11.51□□□□□ -0.57
COPB2-212ENST00000514508 CES4AQ5XG92 561 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms