RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 SPACA6W5XKT8 324 aa18.57■□□□□ 0.56
SQSTM1-215ENST00000514093 STAB1Q9NY15 2570 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 IQANK1A0A1B0GTG1 560 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 SAP18O00422 153 aaKnown RBP18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 DYRK3O43781 588 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 CD22P20273 847 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 IGLV3-21P80748 117 aaPredicted RBP18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 DOC2AQ14183 400 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 ZNF267Q14586 743 aaPredicted RBP18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 HP1BP3Q5SSJ5 553 aaPredicted RBP18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 FNDC7Q5VTL7 733 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 SLC29A4Q7RTT9 530 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 GALNT7Q86SF2 657 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 ANKRD49Q8WVL7 239 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 ABTB1Q969K4 478 aaPredicted RBP18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 FBXL20Q96IG2 436 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 RILPQ96NA2 401 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 TBCDQ9BTW9 1192 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 SORBS1Q9BX66 1292 aaKnown RBP18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 PITHD1Q9GZP4 211 aaPredicted RBP18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 PLAC1Q9HBJ0 212 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 CTNNAL1Q9UBT7 734 aa18.56■□□□□ 0.56
SQSTM1-215ENST00000514093 TAPBPO15533 448 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 PRKRAO75569 313 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 TTC4O95801 387 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 HIST1H1TP22492 207 aaPredicted RBP18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 RPL21P46778 160 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 MASP1P48740 699 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 CBLBQ13191 982 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 NHSL2Q5HYW2 709 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 TRMT10BQ6PF06 316 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 PRSS57Q6UWY2 283 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 PPIL6Q8IXY8 311 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 NKAPQ8N5F7 415 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 SNX31Q8N9S9 440 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 BBOF1Q8ND07 529 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 TMEM79Q9BSE2 394 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 ROGDIQ9GZN7 287 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 UBTD1Q9HAC8 227 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 LZTFL1Q9NQ48 299 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 C15orf41Q9Y2V0 281 aa18.55■□□□□ 0.56
SQSTM1-215ENST00000514093 ANKRD33BA6NCL7 494 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 WASHC1A8K0Z3 465 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 SIAH2O43255 324 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 NAGLUP54802 743 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 PLIN5Q00G26 463 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 RCAN2Q14206 197 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 EBPQ15125 230 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 AP5B1Q2VPB7 878 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 TBCELQ5QJ74 424 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 RNASEH2BQ5TBB1 312 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 CCDC137Q6PK04 289 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 RNF111Q6ZNA4 994 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 YRDCQ86U90 279 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 PACS2Q86VP3 889 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 SPC24Q8NBT2 197 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 INTS12Q96CB8 462 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 PTCD3Q96EY7 689 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 MS4A14Q96JA4 679 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 ART5Q96L15 291 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 KRT12Q99456 494 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 CCL19Q99731 98 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 CAPS2Q9BXY5 557 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 MS4A8Q9BY19 250 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 RPF2Q9H7B2 306 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 DNAJC11Q9NVH1 559 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 TEX10Q9NXF1 929 aaPredicted RBP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 GPRC5BQ9NZH0 403 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 NDRG3Q9UGV2 375 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 CORO1CQ9ULV4 474 aaPredicted RBP18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 NPFFR2Q9Y5X5 522 aa18.54■□□□□ 0.56
SQSTM1-215ENST00000514093 ANK3Q12955 4377 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 TP53I11O14683 189 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 GNB5O14775 395 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 TGFB1P01137 390 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 CYP4B1P13584 511 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 ALOX15P16050 662 aaPredicted RBP18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 SSR2P43308 183 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 HSPA7P48741 367 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 SLC37A1P57057 533 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 SRYQ05066 204 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 SLAMF1Q13291 335 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 RPS6KA2Q15349 733 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 ACKR1Q16570 336 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 C18orf63Q68DL7 685 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 GCNT2Q8N0V5 402 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 TAGAPQ8N103 731 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 SPATA6LQ8N4H0 392 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 SRFBP1Q8NEF9 429 aaKnown RBP18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 SPPL2AQ8TCT8 520 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 ZPLD1Q8TCW7 415 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 ANKRD7Q92527 254 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 MED12Q93074 2177 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 CFAP36Q96G28 342 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 TUBA1CQ9BQE3 449 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 SFXN3Q9BWM7 321 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 ANGPTL4Q9BY76 406 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 EHD1Q9H4M9 534 aa18.53■□□□□ 0.56
SQSTM1-215ENST00000514093 WWOXQ9NZC7 414 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms