RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 VASH2Q86V25 355 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 GPBP1Q86WP2 473 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 GRAMD2AQ8IUY3 354 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 LINC00518Q8N0U6 118 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 LSMEM2Q8N112 164 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 CNBD1Q8NA66 436 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 ZNF397Q8NF99 534 aaPredicted RBP4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 OR5M9Q8NGP3 310 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 OR6S1Q8NH40 331 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 RPLP0P6Q8NHW5 317 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 MAPK15Q8TD08 544 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 VPS35Q96QK1 796 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 ZNF334Q9HCZ1 680 aaPredicted RBP4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 TEX10Q9NXF1 929 aaPredicted RBP4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 SLC6A5Q9Y345 797 aa4.35□□□□□ -1.71
CALCOCO2-222ENST00000514006 IGHV4-4A0A075B6R2 117 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 FAM172BPA6NC97 362 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 GLTPD2A6NH11 291 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 MEI4A8MW99 385 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 E9PMD0 336 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 SGK494L7N484 410 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 ZNF195O14628 629 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 XPO1O14980 1071 aaKnown RBP4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 MTX2O75431 263 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 RHOBTB1O94844 696 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 RPLP0P05388 317 aaKnown RBP4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 FCER2P06734 321 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 ERVK-10P10266 1014 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 CLUP10909 449 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 RPA2P15927 270 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 ATP6V1C1P21283 382 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 OTX2P32243 289 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 GPR183P32249 361 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 DLSTP36957 453 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 PAX9P55771 341 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 HERVK_113P63132 956 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 ERVK-8P63133 956 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 NUCB2P80303 420 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 SPIBQ01892 262 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 RIPK1Q13546 671 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 PDK4Q16654 411 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 CCDC57Q2TAC2 916 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 ANKRD55Q3KP44 614 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 LRIT3Q3SXY7 679 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 POM121L1PQ3SYA9 428 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 ZNF585BQ52M93 769 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 NIPAL3Q6P499 406 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 DPY19L2P2Q6ZN68 376 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 RAB42Q8N4Z0 105 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 RELL2Q8NC24 303 aaPredicted RBP4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 OR10V1Q8NGI7 309 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 WDR36Q8NI36 951 aaKnown RBP4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 LIPHQ8WWY8 451 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 C4orf36Q96KX1 117 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 FUCA2Q9BTY2 467 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 ZSCAN5AQ9BUG6 496 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 RAB11FIP5Q9BXF6 653 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 ERVK-6Q9BXR3 956 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 TRIM6Q9C030 488 aaPredicted RBP4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 GORASP2Q9H8Y8 452 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 SLC25A19Q9HC21 320 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 ZNF71Q9NQZ8 489 aaPredicted RBP4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 GDAP2Q9NXN4 497 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 RDH8Q9NYR8 311 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 SMC3Q9UQE7 1217 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 KLHDC2Q9Y2U9 406 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 C2CD2Q9Y426 696 aa4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 SF3B1O75533 1304 aaKnown RBP eCLIP4.34□□□□□ -1.71
CALCOCO2-222ENST00000514006 A0A1B0GUV1 79 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 A0A1W2PR80 420 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 RNF222A6NCQ9 220 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 A8MUI8 341 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 INSIG1O15503 277 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 CFLARO15519 480 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 KHDRBS3O75525 346 aaKnown RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 STK17BO94768 372 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 HPRP00739 348 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 GSTA1P08263 222 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 ANXA4P09525 319 aaPredicted RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 SNHG28P0DPA3 235 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 NDST1P52848 882 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 RPL27P61353 136 aaKnown RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 RBBP4Q09028 425 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 IL24Q13007 206 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 PARP6Q2NL67 630 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 CCDC152Q4G0S7 254 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 ACSF3Q4G176 576 aaPredicted RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 ZNF311Q5JNZ3 666 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 SPATA46Q5T0L3 261 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 STEAP1BQ6NZ63 245 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 PAQR9Q6ZVX9 377 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 P4HA3Q7Z4N8 544 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 PTAR1Q7Z6K3 402 aaPredicted RBP4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 FAM131BQ86XD5 332 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 HOGA1Q86XE5 327 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 CBWD2Q8IUF1 395 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 ZDHHC17Q8IUH5 632 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 GVQW1Q8N7I0 195 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 FAM133AQ8N9E0 248 aa4.33□□□□□ -1.72
CALCOCO2-222ENST00000514006 OR9Q2Q8NGE9 314 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms