RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 SCN3BQ9NY72 215 aa13.96□□□□□ -0.17
DDR1-271ENST00000513240 NDUFAF4Q9P032 175 aa13.96□□□□□ -0.17
DDR1-271ENST00000513240 TAC3Q9UHF0 121 aa13.96□□□□□ -0.17
DDR1-271ENST00000513240 ATP6V1HQ9UI12 483 aa13.96□□□□□ -0.17
DDR1-271ENST00000513240 MKLN1Q9UL63 735 aa13.96□□□□□ -0.17
DDR1-271ENST00000513240 PLEKHM1Q9Y4G2 1056 aa13.96□□□□□ -0.17
DDR1-271ENST00000513240 LYVE1Q9Y5Y7 322 aa13.96□□□□□ -0.17
DDR1-271ENST00000513240 SLC5A10A0PJK1 596 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 GRXCR2A6NFK2 248 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 ANKDD1BA6NHY2 528 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 SPINT1O43278 529 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 SOD1P00441 154 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 CYP17A1P05093 508 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 ADRA2AP08913 450 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 MPC1LP0DKB6 136 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 C6P13671 934 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 AP1S2P56377 157 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 ST8SIA6P61647 398 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 GNA13Q14344 377 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 MAD2L1BPQ15013 274 aaPredicted RBP13.96□□□□□ -0.18
DDR1-271ENST00000513240 BAK1Q16611 211 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 LIPJQ5W064 366 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 CBLL1Q75N03 491 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 SERPINA11Q86U17 422 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 APH1BQ8WW43 257 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 FBXW5Q969U6 566 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 EXOSC8Q96B26 276 aaKnown RBP13.96□□□□□ -0.18
DDR1-271ENST00000513240 ARSGQ96EG1 525 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 TRAF4Q9BUZ4 470 aaPredicted RBP13.96□□□□□ -0.18
DDR1-271ENST00000513240 CPNE7Q9UBL6 633 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 PPIL1Q9Y3C6 166 aa13.96□□□□□ -0.18
DDR1-271ENST00000513240 PIPSLA2A3N6 862 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 SMIM30A4D0T7 59 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 SERPINI2O75830 405 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 KLHL18O94889 574 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 LINC00271P0C7V0 271 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 FPR1P21462 350 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 CTSKP43235 329 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 TAP2Q03519 686 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 MTAPQ13126 283 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 FADDQ13158 208 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 DOC2BQ14184 412 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 MFSD13AQ14CX5 517 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 ARSKQ6UWY0 536 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 KIAA1324Q6UXG2 1013 aaKnown RBP13.95□□□□□ -0.18
DDR1-271ENST00000513240 ZNF767PQ75MW2 155 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 EIF3MQ7L2H7 374 aaKnown RBP13.95□□□□□ -0.18
DDR1-271ENST00000513240 TRAM1L1Q8N609 369 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 MRPL43Q8N983 215 aaKnown RBP13.95□□□□□ -0.18
DDR1-271ENST00000513240 ZBTB44Q8NCP5 570 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 TMCO6Q96DC7 493 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 HHIPL1Q96JK4 782 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 RSPO3Q9BXY4 272 aaPredicted RBP13.95□□□□□ -0.18
DDR1-271ENST00000513240 ITPAQ9BY32 194 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 SLC6A16Q9GZN6 736 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 SCML1Q9UN30 329 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 A0A1W2PS29 197 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 TIA1P31483 386 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDR1-271ENST00000513240 TALDO1P37837 337 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 MMP12P39900 470 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 GZMKP49863 264 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 HOXC5Q00444 222 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 SCARB2Q14108 478 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 METTL2BQ6P1Q9 378 aaKnown RBP13.95□□□□□ -0.18
DDR1-271ENST00000513240 P3H2Q8IVL5 708 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 OR8H3Q8N146 312 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 SYNPOQ8N3V7 929 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 CHTF18Q8WVB6 975 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 PPCDCQ96CD2 204 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 SLC6A17Q9H1V8 727 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDR1-271ENST00000513240 PCDHGA6Q9Y5G7 932 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 PEX16Q9Y5Y5 336 aa13.95□□□□□ -0.18
DDR1-271ENST00000513240 DNMT3AQ9Y6K1 912 aaPredicted RBP13.95□□□□□ -0.18
DDR1-271ENST00000513240 PLXNB3Q9ULL4 1909 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 TLL1O43897 1013 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 CSTF2P33240 577 aaKnown RBP eCLIP13.94□□□□□ -0.18
DDR1-271ENST00000513240 KIAA1614Q5VZ46 1190 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 GRHL2Q6ISB3 625 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 C16orf78Q8WTQ4 265 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 BADQ92934 168 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 RDH12Q96NR8 316 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 APOL4Q9BPW4 351 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 C11orf16Q9NQ32 467 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 ASIC5Q9NY37 505 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 RPS6KA6Q9UK32 745 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.94□□□□□ -0.18
DDR1-271ENST00000513240 A0A1W2PQ09 198 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 C1orf226A1L170 272 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 TBC1D3BA6NDS4 549 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 M0R082 166 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 MYL9P24844 172 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 CBX5P45973 191 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 GGTA1PQ4G0N0 100 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 IQCCQ4KMZ1 466 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 FAM109BQ6ICB4 259 aaPredicted RBP13.94□□□□□ -0.18
DDR1-271ENST00000513240 CAPN13Q6MZZ7 669 aaPredicted RBP13.94□□□□□ -0.18
DDR1-271ENST00000513240 SHISA5Q8N114 240 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 LGI4Q8N135 537 aa13.94□□□□□ -0.18
DDR1-271ENST00000513240 VPS37AQ8NEZ2 397 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms