RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 EEF1E1-BLOC1S5C9J1V9 151 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 EEF1E1O43324 174 aaKnown RBP12.76□□□□□ -0.37
SPCS3-204ENST00000513139 GUCA1CO95843 209 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 BMP7P18075 431 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 TNNI3P19429 210 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 TRPC1P48995 793 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 MTTPP55157 894 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 CDKN2DP55273 166 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 LIM2P55344 173 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 ASPHQ12797 758 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 CBLBQ13191 982 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 CRYMQ14894 314 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 POU4F3Q15319 338 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 ADPRMQ3LIE5 342 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 HSP90AA5PQ58FG0 334 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 LYPD8Q6UX82 237 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.76□□□□□ -0.37
SPCS3-204ENST00000513139 C2CD4AQ8NCU7 369 aaPredicted RBP12.76□□□□□ -0.37
SPCS3-204ENST00000513139 OR2L5Q8NG80 312 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 NDNQ99608 321 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 ANKZF1Q9H8Y5 726 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 CALHM2Q9HA72 323 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 TRPS1Q9UHF7 1281 aa12.76□□□□□ -0.37
SPCS3-204ENST00000513139 EIF3LQ9Y262 564 aaKnown RBP12.76□□□□□ -0.37
SPCS3-204ENST00000513139 CHCHD2Q9Y6H1 151 aaPredicted RBP12.76□□□□□ -0.37
SPCS3-204ENST00000513139 ANKRD33BA6NCL7 494 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 CASKO14936 926 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 SMAD7O15105 426 aaKnown RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 H2AFYO75367 372 aaKnown RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 CLEC3AO75596 197 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 GDF1P27539 372 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 MAGEA4P43358 317 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 NHSL2Q5HYW2 709 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 TBCELQ5QJ74 424 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 PRAMEF20Q5VT98 475 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 STEAP4Q687X5 459 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 VASNQ6EMK4 673 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 TRIM40Q6P9F5 258 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 TRMT10BQ6PF06 316 aaKnown RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 TMIGD1Q6UXZ0 262 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 YTHDF3Q7Z739 585 aaKnown RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 VWA5B2Q8N398 1253 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 GABPB2Q8TAK5 448 aaPredicted RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 PYROXD1Q8WU10 500 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 LRRC39Q96DD0 335 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 PDLIM5Q96HC4 596 aaKnown RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 SECISBP2Q96T21 854 aaKnown RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 CSF3RQ99062 836 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 NAT9Q9BTE0 207 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 RBM24Q9BX46 236 aaKnown RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 PITHD1Q9GZP4 211 aaPredicted RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 REXO4Q9GZR2 422 aaKnown RBP12.75□□□□□ -0.37
SPCS3-204ENST00000513139 SLC22A14Q9Y267 594 aa12.75□□□□□ -0.37
SPCS3-204ENST00000513139 EIF3HO15372 352 aaKnown RBP eCLIP12.74□□□□□ -0.37
SPCS3-204ENST00000513139 TRIM3O75382 744 aaPredicted RBP12.74□□□□□ -0.37
SPCS3-204ENST00000513139 ERN1O75460 977 aaKnown RBP12.74□□□□□ -0.37
SPCS3-204ENST00000513139 CRLF1O75462 422 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 ETHE1O95571 254 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 TTC4O95801 387 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 IGKV3-11P04433 115 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 FBXO45P0C2W1 286 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 FAM153BP0C7A2 387 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 C1GALT1C1LP0DN25 315 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 COX7A2P14406 83 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 GNAZP19086 355 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 FPR1P21462 350 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 SERPINB3P29508 390 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 SSTR1P30872 391 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 PLA2G16P53816 162 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 ERCC6LQ2NKX8 1250 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 FAM153CQ494X1 144 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 SPANXN3Q5MJ09 141 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 UBAP2Q5T6F2 1119 aaKnown RBP12.74□□□□□ -0.37
SPCS3-204ENST00000513139 ABHD17CQ6PCB6 329 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 SBSNQ6UWP8 590 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 C9orf40Q8IXQ3 194 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 GSPT2Q8IYD1 628 aaKnown RBP12.74□□□□□ -0.37
SPCS3-204ENST00000513139 FAM13CQ8NE31 585 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 SENP5Q96HI0 755 aaPredicted RBP12.74□□□□□ -0.37
SPCS3-204ENST00000513139 ZNF597Q96LX8 424 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 JSRP1Q96MG2 331 aaPredicted RBP12.74□□□□□ -0.37
SPCS3-204ENST00000513139 ZFP3Q96NJ6 502 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 DOHHQ9BU89 302 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 NT5DC2Q9H857 520 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 LYRM4Q9HD34 91 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 IARS2Q9NSE4 1012 aaKnown RBP12.74□□□□□ -0.37
SPCS3-204ENST00000513139 GALNT8Q9NY28 637 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 NDRG3Q9UGV2 375 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 CNOT11Q9UKZ1 510 aaKnown RBP12.74□□□□□ -0.37
SPCS3-204ENST00000513139 ABCA1O95477 2261 aa12.74□□□□□ -0.37
SPCS3-204ENST00000513139 MYOCOSA0A1B0GUC4 107 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 ANKDD1BA6NHY2 528 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 LDB3O75112 727 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 PIAS1O75925 651 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 TBX6O95947 436 aaPredicted RBP12.73□□□□□ -0.37
SPCS3-204ENST00000513139 HPNP05981 417 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 TMIGD3P0DMS9 266 aaPredicted RBP12.73□□□□□ -0.37
SPCS3-204ENST00000513139 CERS1P27544 350 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 GABRB3P28472 473 aa12.73□□□□□ -0.37
SPCS3-204ENST00000513139 HNMTP50135 292 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms