RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ANKRD49Q8WVL7 239 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 CAPZA3Q96KX2 299 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 SGCZQ96LD1 299 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 PWWP2AQ96N64 755 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 TREX2Q9BQ50 279 aaPredicted RBP6.66□□□□□ -1.34
USP46-208ENST00000512656 TBCDQ9BTW9 1192 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 ALOXE3Q9BYJ1 711 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 TRIM31Q9BZY9 425 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 AICDAQ9GZX7 198 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 DEFB127Q9H1M4 99 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 LYRM4Q9HD34 91 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 TRMT1Q9NXH9 659 aaKnown RBP6.66□□□□□ -1.34
USP46-208ENST00000512656 CD274Q9NZQ7 290 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 MYOTQ9UBF9 498 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 RNF14Q9UBS8 474 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 VTI1BQ9UEU0 232 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 DAPP1Q9UN19 280 aa6.66□□□□□ -1.34
USP46-208ENST00000512656 OR14I1A6ND48 311 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 C17orf105B2RV13 164 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 FAM47E-STBD1D6RA91 191 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 WWP2O00308 870 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 CYR61O00622 381 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 BCKDKO14874 412 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 EIF3HO15372 352 aaKnown RBP eCLIP6.65□□□□□ -1.34
USP46-208ENST00000512656 ZNHIT1O43257 154 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 PDE9AO76083 593 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 OR6B1O95007 311 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 HOXD4P09016 255 aaPredicted RBP6.65□□□□□ -1.34
USP46-208ENST00000512656 CCDC166P0CW27 439 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 STMN1P16949 149 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 CNR1P21554 472 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 CERS1P27544 350 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 PPP2R1BP30154 601 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 CASP2P42575 452 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 IRF8Q02556 426 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 DOC2AQ14183 400 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 CDSNQ15517 529 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 TBCCQ15814 346 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 AP5B1Q2VPB7 878 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 C18orf21Q32NC0 220 aaPredicted RBP6.65□□□□□ -1.34
USP46-208ENST00000512656 TMEM35AQ53FP2 167 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 DNAJC14Q6Y2X3 702 aaPredicted RBP6.65□□□□□ -1.34
USP46-208ENST00000512656 NCCRP1Q6ZVX7 275 aaPredicted RBP6.65□□□□□ -1.34
USP46-208ENST00000512656 CLNKQ7Z7G1 428 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 CLYBLQ8N0X4 340 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 LILRA2Q8N149 483 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 GOLM1Q8NBJ4 401 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 FAM13CQ8NE31 585 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 MYRIPQ8NFW9 859 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 OR2M7Q8NG81 312 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 OR52N2Q8NGI0 321 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 OR5M3Q8NGP4 307 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 PTPMT1Q8WUK0 201 aaPredicted RBP6.65□□□□□ -1.34
USP46-208ENST00000512656 WDR34Q96EX3 536 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 ART5Q96L15 291 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 F2RL3Q96RI0 385 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 RASL10BQ96S79 203 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 SMC6Q96SB8 1091 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 KRT12Q99456 494 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 CPNE1Q99829 537 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 FAM173AQ9BQD7 235 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 WDR83Q9BRX9 315 aaKnown RBP6.65□□□□□ -1.34
USP46-208ENST00000512656 CENPKQ9BS16 269 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 RSRP1Q9BUV0 290 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 OR8D2Q9GZM6 311 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 EPB41L4BQ9H329 900 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 ZDHHC11Q9H8X9 412 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 SACM1LQ9NTJ5 587 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.65□□□□□ -1.34
USP46-208ENST00000512656 MS4A12Q9NXJ0 267 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 ZNF223Q9UK11 482 aaPredicted RBP6.65□□□□□ -1.34
USP46-208ENST00000512656 ZNF490Q9ULM2 529 aaPredicted RBP6.65□□□□□ -1.34
USP46-208ENST00000512656 RNF6Q9Y252 685 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 SAR1BQ9Y6B6 198 aa6.65□□□□□ -1.34
USP46-208ENST00000512656 INTS1Q8N201 2190 aaKnown RBP6.65□□□□□ -1.35
USP46-208ENST00000512656 DNAJC13O75165 2243 aa6.65□□□□□ -1.35
USP46-208ENST00000512656 ZFHX3Q15911 3703 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 ZNF407Q9C0G0 2248 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 TMEM200CA6NKL6 621 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 FAM90A27PA6NNH2 459 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 FAM166BA8MTA8 275 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 NPIPA2E9PIF3 369 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 NPIPA3F8WFD2 350 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 TAPBPO15533 448 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 PRKNO60260 465 aaPredicted RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 SUSD5O60279 629 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CCNT2O60583 730 aaKnown RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 P04436 131 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 GSTA2P09210 222 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 MED14OSP0DP75 135 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 IGFBP2P18065 325 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 HIST1H1TP22492 207 aaPredicted RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 ACVR2AP27037 513 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 CFPP27918 469 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 TLX1P31314 330 aaPredicted RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 SPRP35270 261 aaPredicted RBP6.64□□□□□ -1.35
USP46-208ENST00000512656 GP5P40197 560 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SOX3P41225 446 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 MSH2P43246 934 aa6.64□□□□□ -1.35
USP46-208ENST00000512656 SSR2P43308 183 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms