RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CDK16Q00536 496 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 NAAAQ02083 359 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 TLE3Q04726 772 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF33AQ06730 810 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 HSPB3Q12988 150 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 GK3PQ14409 553 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 SHBQ15464 509 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 TPD52L1Q16890 204 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 HLA-DQA1Q5Y7H0 255 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 METTL7BQ6UX53 244 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 DOK3Q7L591 496 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 DHDDSQ86SQ9 333 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 SERPINA9Q86WD7 417 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 MICU2Q8IYU8 434 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 FGFRL1Q8N441 504 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 CHPT1Q8WUD6 406 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF775Q96BV0 537 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 FYTTD1Q96QD9 318 aaKnown RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 FSD1LQ9BXM9 530 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 TRIM45Q9H8W5 580 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 COG4Q9H9E3 785 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 CD320Q9NPF0 282 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 SPHK1Q9NYA1 384 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 CYB5R1Q9UHQ9 305 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 B3GNT3Q9Y2A9 372 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 RAXQ9Y2V3 346 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 CEPT1Q9Y6K0 416 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 KCPQ6ZWJ8 1503 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 BCL9LQ86UU0 1499 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 XDHP47989 1333 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 ARGFXA6NJG6 315 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 ADARB2-AS1A8MUL3 147 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 MCIDASD6RGH6 385 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 PMPCBO75439 489 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 GPC4O75487 556 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 TRIM49P0CI25 452 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 TRIM49CP0CI26 452 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 PSKH1P11801 424 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF18P17022 549 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 TEAD1P28347 426 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 LAP3P28838 519 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 NSFP46459 744 aaKnown RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 CCZ1BP86790 482 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 CCZ1P86791 482 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 SORDQ00796 357 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 ITGADQ13349 1161 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 FAM46CQ5VWP2 391 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 SUSD4Q5VX71 490 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 CCDC121Q6ZUS5 278 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF546Q86UE3 836 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 SLCO6A1Q86UG4 719 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 SYNE4Q8N205 404 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 BEND7Q8N7W2 519 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 OR2AJ1Q8NGZ0 328 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 ADAMTS16Q8TE57 1224 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 GTF2H4Q92759 462 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 OTUB2Q96DC9 234 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZNF274Q96GC6 653 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 COQ2Q96H96 371 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 SEPT5Q99719 369 aaPredicted RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 BEX2Q9BXY8 128 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 TM6SF2Q9BZW4 377 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 NXF3Q9H4D5 531 aaKnown RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 TXLNGQ9NUQ3 528 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 GAR1Q9NY12 217 aaKnown RBP5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 PSMD13Q9UNM6 376 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 FAM96BQ9Y3D0 163 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 URGCP-MRPS24S4R325 110 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 LAMB4A4D0S4 1761 aa5.88□□□□□ -1.47
TRAPPC11-209ENST00000512476 SNED1Q8TER0 1413 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 A0A0A0MQY5 61 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 ANKUB1A6NFN9 424 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 TUBAL3A6NHL2 446 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 FADS2P1A8MWK0 482 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 RS1O15537 224 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 SDC3O75056 442 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 TOP3BO95985 862 aaKnown RBP5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 EGFP01133 1207 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 IFNA6P05013 189 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 ALDOCP09972 364 aaKnown RBP5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 MCF2P10911 925 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 UGT1A4P22310 534 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 ACKR3P25106 362 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 UGT1A3P35503 534 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 UGT1A5P35504 534 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 TNFRSF4P43489 277 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 JAK3P52333 1124 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 SIRPAP78324 504 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 CSTF1Q05048 431 aaKnown RBP5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 WDR72Q3MJ13 1102 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 AGKQ53H12 422 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 FAM69BQ5VUD6 431 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 ALS2CLQ60I27 953 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 CAPN13Q6MZZ7 669 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 TEPPQ6URK8 271 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 TBC1D26Q86UD7 250 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 CACUL1Q86Y37 369 aa5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 ZC3H3Q8IXZ2 948 aaKnown RBP5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 SMG8Q8ND04 991 aaKnown RBP5.87□□□□□ -1.47
TRAPPC11-209ENST00000512476 FBXL13Q8NEE6 735 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms