RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RNF145Q96MT1 663 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 BTBD9Q96Q07 612 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 SIGLEC11Q96RL6 698 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 KRT12Q99456 494 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 NPY6RQ99463 290 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 TEAD3Q99594 435 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CPPED1Q9BRF8 314 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF251Q9BRH9 671 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 C7orf50Q9BRJ6 194 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 C2orf88Q9BSF0 95 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 COPS4Q9BT78 406 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 NAT9Q9BTE0 207 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 C1orf43Q9BWL3 253 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 HINT2Q9BX68 163 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ANO3Q9BYT9 981 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 EGLN1Q9GZT9 426 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 WWP1Q9H0M0 922 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MAGT1Q9H0U3 335 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 OR10A5Q9H207 317 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GANQ9H2C0 597 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 SPNS1Q9H2V7 528 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 NXF3Q9H4D5 531 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 RANBP3Q9H6Z4 567 aaPredicted RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GEMIN7Q9H840 131 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 VIPAS39Q9H9C1 493 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 LRRC4Q9HBW1 653 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GLOD4Q9HC38 313 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ZFP14Q9HCL3 533 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 IFT46Q9NQC8 304 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 RGS18Q9NS28 235 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ABCC13Q9NSE7 274 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 ERAP1Q9NZ08 941 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MTCH1Q9NZJ7 389 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MYEF2Q9P2K5 600 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 EIF3KQ9UBQ5 218 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MGAT4BQ9UQ53 548 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 GDAQ9Y2T3 454 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 NDUFAF1Q9Y375 327 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 RIPK3Q9Y572 518 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 MRPS18BQ9Y676 258 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 NALCNQ8IZF0 1738 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 FAM208AQ9UK61 1670 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 CPSF1Q10570 1443 aaKnown RBP4.28□□□□□ -1.72
NIPBL-206ENST00000509429 TUBGCP6Q96RT7 1819 aa4.28□□□□□ -1.72
NIPBL-206ENST00000509429 PNPLA6Q8IY17 1366 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 KIAA0232Q92628 1395 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CPS1P31327 1500 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ARHGEF40Q8TER5 1519 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 FMN2Q9NZ56 1722 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 C3P01024 1663 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 RIMS1Q86UR5 1692 aaKnown RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TOPAZ1Q8N9V7 1692 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CD163L1Q9NR16 1453 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 A0A1B0GV90 55 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 FAM240BA0A1B0GVZ2 78 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SLC5A10A0PJK1 596 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 C17orf102A2RUQ5 167 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 TUBAL3A6NHL2 446 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 A6NIZ1 184 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 METTL15A6NJ78 407 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 RFPL4AA6NLU0 287 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ARHGEF33A8MVX0 844 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CDRT15L2A8MXV6 281 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 RFPL4AL1F8VTS6 287 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 H7C1D1 291 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CCRL2O00421 344 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 RNASET2O00584 256 aaKnown RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ABCD4O14678 606 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 BCKDKO14874 412 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SURF4O15260 269 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ST8SIA3O43173 380 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 AQP9O43315 295 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF208O43345 1280 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SPRY1O43609 319 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 NME2P1O60361 137 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 HSF2BPO75031 334 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ERN1O75460 977 aaKnown RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 IFNA2P01563 188 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 IFNGP01579 166 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CXCL10P02778 98 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MT-ND5P03915 603 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 LCKP06239 509 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 MELTFP08582 738 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 GNAI3P08754 354 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 RBP1P09455 135 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 CTSAP10619 480 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 SLC2A1P11166 492 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 NR2C1P13056 603 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 COX4I1P13073 169 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 FOSL2P15408 326 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 PFKFB1P16118 471 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 GABRB1P18505 474 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ME2P23368 584 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 PRKCHP24723 683 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 RCVRNP35243 200 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 YAP1P46937 504 aaKnown RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 OR3A3P47888 321 aa4.27□□□□□ -1.73
NIPBL-206ENST00000509429 PTDSS1P48651 473 aaKnown RBP4.27□□□□□ -1.73
NIPBL-206ENST00000509429 ARRB1P49407 418 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms