RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 DIMT1Q9UNQ2 313 aaKnown RBP4.79□□□□□ -1.64
GYPB-210ENST00000508841 ATG4BQ9Y4P1 393 aa4.79□□□□□ -1.64
GYPB-210ENST00000508841 TEX264Q9Y6I9 313 aa4.79□□□□□ -1.64
GYPB-210ENST00000508841 COL5A2P05997 1499 aaPredicted RBP4.79□□□□□ -1.64
GYPB-210ENST00000508841 TLR4O00206 839 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 CALCAP01258 141 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 HOXD4P09016 255 aaPredicted RBP4.78□□□□□ -1.64
GYPB-210ENST00000508841 CALML3P27482 149 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 ATP6V1E1P36543 226 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 TNFRSF4P43489 277 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 ACADSBP45954 432 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 NUMBP49757 651 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 PRELPP51888 382 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 LIMK2P53671 638 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 SLC1A5Q15758 541 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 VWA2Q5GFL6 755 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 DCAF12Q5T6F0 453 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 C9orf66Q5T8R8 295 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 SEL1L3Q68CR1 1132 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 WDR49Q8IV35 697 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 BATF2Q8N1L9 274 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 POM121L12Q8N7R1 296 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 EXOC6Q8TAG9 804 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 DTD2Q96FN9 168 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 RAB11FIP5Q9BXF6 653 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 MRPL11Q9Y3B7 192 aaKnown RBP4.78□□□□□ -1.64
GYPB-210ENST00000508841 CPQQ9Y646 472 aa4.78□□□□□ -1.64
GYPB-210ENST00000508841 DHX29Q7Z478 1369 aaKnown RBP4.78□□□□□ -1.64
GYPB-210ENST00000508841 MACROD2A1Z1Q3 448 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 DUSP11O75319 330 aaKnown RBP4.77□□□□□ -1.65
GYPB-210ENST00000508841 FOSL2P15408 326 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 PPP2R1BP30154 601 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 ID1P41134 155 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 NDST1P52848 882 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 CD300CQ08708 224 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 EMC2Q15006 297 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 EXOSC7Q15024 291 aaKnown RBP4.77□□□□□ -1.65
GYPB-210ENST00000508841 HIGD2BQ4VC39 106 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 GPAT3Q53EU6 434 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 REP15Q6BDI9 236 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 RHBDD2Q6NTF9 364 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 EMBQ6PCB8 327 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 CWC27Q6UX04 472 aaKnown RBP4.77□□□□□ -1.65
GYPB-210ENST00000508841 MIER3Q7Z3K6 550 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 GPR142Q7Z601 462 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 RABEPKQ7Z6M1 372 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 SLC25A42Q86VD7 318 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 LYG1Q8N1E2 194 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 RUFY1Q96T51 708 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 KRTAP4-4Q9BYR3 166 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 CARD9Q9H257 536 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 GNB4Q9HAV0 340 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 EIF3KQ9UBQ5 218 aaKnown RBP4.77□□□□□ -1.65
GYPB-210ENST00000508841 TUBGCP4Q9UGJ1 667 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.77□□□□□ -1.65
GYPB-210ENST00000508841 CSAG2Q9Y5P2 127 aa4.77□□□□□ -1.65
GYPB-210ENST00000508841 IGHV3-16A0A0C4DH30 117 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 TRIM49BA6NDI0 452 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 CXCL14O95715 111 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 MT-ND1P03886 318 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 OR9G9P0C7N8 305 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 GATA1P15976 413 aaPredicted RBP4.76□□□□□ -1.65
GYPB-210ENST00000508841 IL4RP24394 825 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 MTIF2P46199 727 aaKnown RBP4.76□□□□□ -1.65
GYPB-210ENST00000508841 RPL34P49207 117 aaKnown RBP4.76□□□□□ -1.65
GYPB-210ENST00000508841 HNRNPFP52597 415 aaKnown RBP4.76□□□□□ -1.65
GYPB-210ENST00000508841 HERC4Q5GLZ8 1057 aaPredicted RBP4.76□□□□□ -1.65
GYPB-210ENST00000508841 PRAMEF7Q5VXH5 474 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 LINC00518Q8N0U6 118 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 MRPL53Q96EL3 112 aaKnown RBP4.76□□□□□ -1.65
GYPB-210ENST00000508841 RBM18Q96H35 190 aaKnown RBP4.76□□□□□ -1.65
GYPB-210ENST00000508841 CAPNS2Q96L46 248 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 CCDC28BQ9BUN5 200 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 CXXC4Q9H2H0 198 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 ELL3Q9HB65 397 aaPredicted RBP4.76□□□□□ -1.65
GYPB-210ENST00000508841 ANO10Q9NW15 660 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 KCNN3Q9UGI6 736 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 ENTPD4Q9Y227 616 aa4.76□□□□□ -1.65
GYPB-210ENST00000508841 AFF2P51816 1311 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 A0A1B0GTH9 108 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 SH3PXD2BA1X283 911 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 GALR3O60755 368 aaPredicted RBP4.75□□□□□ -1.65
GYPB-210ENST00000508841 SH3BGRLO75368 114 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 CRLF1O75462 422 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 MT-ND3P03897 115 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 FCGR3AP08637 254 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 ACADSP16219 412 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 GSK3BP49841 420 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 EPC2Q52LR7 807 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 ARMCX5Q6P1M9 558 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 PLBD1Q6P4A8 553 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 OLFM4Q6UX06 510 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 CHDHQ8NE62 594 aaPredicted RBP4.75□□□□□ -1.65
GYPB-210ENST00000508841 URGCPQ8TCY9 931 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 PNPLA2Q96AD5 504 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 WBP1Q96G27 269 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 COG3Q96JB2 828 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 PYGO2Q9BRQ0 406 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 SPXQ9BT56 116 aa4.75□□□□□ -1.65
GYPB-210ENST00000508841 RPP25Q9BUL9 199 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms