RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 KLRB1Q12918 225 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 RAPSNQ13702 412 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 LY6DQ14210 128 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 KIAA0040Q15053 153 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 H3F3CQ6NXT2 135 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 SLC29A4Q7RTT9 530 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 WDR75Q8IWA0 830 aaKnown RBP8.53□□□□□ -1.04
NUP54-207ENST00000508583 GALNT12Q8IXK2 581 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 NATD1Q8N6N6 113 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 EXD3Q8N9H8 876 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 OR7G1Q8NGA0 311 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 OR1N1Q8NGS0 311 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ZFP28Q8NHY6 868 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 SUN3Q8TAQ9 357 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 SLC2A12Q8TD20 617 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ELP5Q8TE02 316 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 PTPMT1Q8WUK0 201 aaPredicted RBP8.53□□□□□ -1.04
NUP54-207ENST00000508583 NCLNQ969V3 563 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 MTERF3Q96E29 417 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 MAGEB18Q96M61 343 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 BBC3Q96PG8 261 aaPredicted RBP8.53□□□□□ -1.04
NUP54-207ENST00000508583 BBS4Q96RK4 519 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 NUDT9Q9BW91 350 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 SEMA4CQ9C0C4 833 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 OR8D2Q9GZM6 311 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 MEAF6Q9HAF1 191 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 SLC35C2Q9NQQ7 365 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ATAD3AQ9NVI7 634 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ZNF446Q9NWS9 450 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 ASIC5Q9NY37 505 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 TAS2R7Q9NYW3 318 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 PTGFRNQ9P2B2 879 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 CLDN16Q9Y5I7 305 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 HEMK1Q9Y5R4 338 aaPredicted RBP8.53□□□□□ -1.04
NUP54-207ENST00000508583 PTGDR2Q9Y5Y4 395 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 CNTRLQ7Z7A1 2325 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 CROCCQ5TZA2 2017 aa8.53□□□□□ -1.04
NUP54-207ENST00000508583 TRBV11-1A0A0K0K1C0 115 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 ATP6AP2A0A1C7CYW4 349 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 A8MUA0 341 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 A8MUI8 341 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 TGFBR3LH3BV60 316 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 PGRMC2O15173 223 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 PRKRAO75569 313 aaKnown RBP8.52□□□□□ -1.05
NUP54-207ENST00000508583 ATP6AP2O75787 350 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 TGDSO95455 350 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 LBPP18428 481 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 SDC1P18827 310 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 PRPS1L1P21108 318 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 NT5EP21589 574 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 SOX11P35716 441 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 PSPHP78330 225 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 EMX2Q04743 252 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 Q0VFX4 171 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 TLR1Q15399 786 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 RFTN2Q52LD8 501 aaPredicted RBP8.52□□□□□ -1.05
NUP54-207ENST00000508583 ACER2Q5QJU3 275 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 C6orf136Q5SQH8 315 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 FAM71E1Q6IPT2 247 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 IGFL2Q6UWQ7 119 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 RNF111Q6ZNA4 994 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 RGS9BPQ6ZS82 235 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 RPS19BP1Q86WX3 136 aaKnown RBP8.52□□□□□ -1.05
NUP54-207ENST00000508583 OR4N5Q8IXE1 308 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 GPALPP1Q8IXQ4 340 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 DND1Q8IYX4 353 aaKnown RBP8.52□□□□□ -1.05
NUP54-207ENST00000508583 VWA5B2Q8N398 1253 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 SIRT6Q8N6T7 355 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 APCDD1LQ8NCL9 501 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 NFAM1Q8NET5 270 aaPredicted RBP8.52□□□□□ -1.05
NUP54-207ENST00000508583 OR2T11Q8NH01 316 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 NUBPLQ8TB37 319 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 EXOSC8Q96B26 276 aaKnown RBP8.52□□□□□ -1.05
NUP54-207ENST00000508583 PPCDCQ96CD2 204 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 ZBED6CLQ96FA7 236 aaPredicted RBP8.52□□□□□ -1.05
NUP54-207ENST00000508583 SENP5Q96HI0 755 aaPredicted RBP8.52□□□□□ -1.05
NUP54-207ENST00000508583 MESP1Q9BRJ9 268 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 SIKE1Q9BRV8 207 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 CNPPD1Q9BV87 410 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 NUF2Q9BZD4 464 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 REEP4Q9H6H4 257 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 CXorf21Q9HAI6 301 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 ZNF71Q9NQZ8 489 aaPredicted RBP8.52□□□□□ -1.05
NUP54-207ENST00000508583 STMN3Q9NZ72 180 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 CES1P1Q9UKY3 287 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 B3GNT3Q9Y2A9 372 aa8.52□□□□□ -1.05
NUP54-207ENST00000508583 TRAV17A0A0B4J275 112 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 MASP2O00187 686 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 TBX19O60806 448 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 PRAMEF2O60811 474 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 COQ9O75208 318 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 DDAH2O95865 285 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 IFI6P09912 130 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 BCKDHAP12694 445 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 CLNS1AP54105 237 aaKnown RBP8.51□□□□□ -1.05
NUP54-207ENST00000508583 IRX1P78414 480 aaPredicted RBP8.51□□□□□ -1.05
NUP54-207ENST00000508583 C19orf57Q0VDD7 668 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 NFATC3Q12968 1075 aa8.51□□□□□ -1.05
NUP54-207ENST00000508583 ZNF267Q14586 743 aaPredicted RBP8.51□□□□□ -1.05
NUP54-207ENST00000508583 CEBPEQ15744 281 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms