RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 LRRC32Q14392 662 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 LASP1Q14847 261 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 SLC27A4Q6P1M0 643 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 C6orf120Q7Z4R8 191 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 C16orf78Q8WTQ4 265 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 RFT1Q96AA3 541 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 NUDT15Q9NV35 164 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 P2RX2Q9UBL9 471 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 PQBP1O60828 265 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 IFNA7P01567 189 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 CD9P21926 228 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 OPALINQ96PE5 141 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 AIF1LQ9BQI0 150 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 DPAGT1Q9H3H5 408 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 DNMT3BQ9UBC3 853 aaKnown RBP13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 SLC6A14Q9UN76 642 aa13.95□□□□□ -0.18
ATP2C1-214ENST00000508532 WASHC1A8K0Z3 465 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 B4GALT3O60512 393 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 ALAS2P22557 587 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 MTAPQ13126 283 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 SLC36A4Q6YBV0 504 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 ST6GAL2Q96JF0 529 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 C7orf34Q96L11 122 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 CCL27Q9Y4X3 112 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 GPR37L1O60883 481 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 KHDRBS3O75525 346 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 ATF6P18850 670 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 ARSIQ5FYB1 569 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 LDLRAD1Q5T700 205 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 METTL2BQ6P1Q9 378 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 L3MBTL4Q8NA19 623 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 ACER3Q9NUN7 267 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 NDRG2Q9UN36 371 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 CHURC1-FNTBB4DL54 471 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 RNASET2O00584 256 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 OR7A10O76100 309 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 EPHX1P07099 455 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 SRPRAP08240 638 aaKnown RBP13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 UQCRC2P22695 453 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 SSTR2P30874 369 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 GPLD1P80108 840 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 MLLT11Q13015 90 aaPredicted RBP13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 NTRK2Q16620 822 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 C22orf39Q6P5X5 142 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 GDPD4Q6W3E5 623 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 SLC30A8Q8IWU4 369 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 UBTD2Q8WUN7 234 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 SCRN2Q96FV2 425 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 FAIM2Q9BWQ8 316 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 ARID1BQ8NFD5 2236 aaPredicted RBP13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 H3BQ06 376 aaPredicted RBP13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 GRM6O15303 877 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 MID1O15344 667 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 IL1AP01583 271 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 MPC1LP0DKB6 136 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 HSD3B1P14060 373 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 HSD3B2P26439 372 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 CD70P32970 193 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 SPINT3P49223 89 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 AKR1D1P51857 326 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 CCSMST1Q4G0I0 132 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 GRHL2Q6ISB3 625 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 RIPOR3Q96MK2 946 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 PKMYT1Q99640 499 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 SRRDQ9UH36 339 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 TBC1D24Q9ULP9 559 aa13.94□□□□□ -0.18
ATP2C1-214ENST00000508532 POLR1CO15160 346 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 HCN1O60741 890 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 SAGP10523 405 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 NCBP2P52298 156 aaKnown RBP eCLIP13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 PCDH1Q08174 1060 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 IL20RBQ6UXL0 311 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 HDDC2Q7Z4H3 204 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 BEST4Q8NFU0 473 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 EID2BQ96D98 161 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 TTYH1Q9H313 450 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 TMEM138Q9NPI0 162 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 PHF11Q9UIL8 331 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 FBXW2Q9UKT8 454 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 CSF3P09919 207 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 ANXA3P12429 323 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 DNASE1P24855 282 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 CTBP2P56545 445 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 GPR50Q13585 617 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 MTFR2Q6P444 385 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 TBC1D19Q8N5T2 526 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 SLC5A11Q8WWX8 675 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 TAC3Q9UHF0 121 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 TRBV5-3A0A0A0MS03 114 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 FRS3O43559 492 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 C8orf89P0DMQ9 161 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 DRD5P21918 477 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 CTSOP43234 321 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 PNLIPRP1P54315 467 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 MTSS1LQ765P7 747 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 OLIG3Q7RTU3 272 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 LILRA3Q8N6C8 439 aaPredicted RBP13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 CYB5D2Q8WUJ1 264 aa13.93□□□□□ -0.18
ATP2C1-214ENST00000508532 BTN2A2Q8WVV5 523 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms