RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 KCNJ11Q14654 390 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 GRM3Q14832 879 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 FASTKD3Q14CZ7 662 aaKnown RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 PCLAFQ15004 111 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 TPSAB1Q15661 275 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CA9Q16790 459 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 SMTNL2Q2TAL5 461 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 TRIM60Q495X7 471 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 EPC2Q52LR7 807 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 LBHQ53QV2 105 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ASPRV1Q53RT3 343 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 C6orf141Q5SZD1 244 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 N4BP2L1Q5TBK1 243 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 LRRC66Q68CR7 880 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ARHGAP17Q68EM7 881 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 GDPGP1Q6ZNW5 385 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 C18orf65Q6ZTR6 163 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 GDPD3Q7L5L3 318 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CHST15Q7LFX5 561 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 PIWIL4Q7Z3Z4 852 aaKnown RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 BNIPLQ7Z465 357 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 R3HCC1LQ7Z5L2 792 aaKnown RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 C11orf96Q7Z7L8 435 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 SYVN1Q86TM6 617 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 TRIM69Q86WT6 500 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 PHF13Q86YI8 300 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 NKAIN4Q8IVV8 208 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 TIGD4Q8IY51 512 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 RNF113BQ8IZP6 322 aaKnown RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 FAM9CQ8IZT9 166 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 MINDY1Q8N5J2 469 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 Q8N9G6 341 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 TMEM35BQ8NCS4 154 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF680Q8NEM1 530 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 OR4D10Q8NGI6 311 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 SPATA18Q8TC71 538 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 GANCQ8TET4 914 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 YIPF5Q969M3 257 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 C18orf25Q96B23 403 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 PHF21AQ96BD5 680 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 LGALS12Q96DT0 336 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 YIPF6Q96EC8 236 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 HSFY1Q96LI6 401 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF300Q96RE9 604 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 KLF6Q99612 283 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC30A2Q9BRI3 323 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 UGT2B28Q9BY64 529 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 UCK2Q9BZX2 261 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 DCSTAMPQ9H295 470 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 LHX5Q9H2C1 402 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 PIGUQ9H490 435 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF385DQ9H6B1 395 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 NT5DC2Q9H857 520 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 FOLH1BQ9HBA9 442 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 LRRC4Q9HBW1 653 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 BIN3Q9NQY0 253 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 FAM49BQ9NUQ9 324 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 IMP3Q9NV31 184 aaKnown RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 DMAC2Q9NW81 257 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 MCUBQ9NWR8 336 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 TAS2R14Q9NYV8 317 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF224Q9NZL3 707 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 DNAJB9Q9UBS3 223 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CD300AQ9UGN4 299 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 NDRG3Q9UGV2 375 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 UBQLN2Q9UHD9 624 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 KCNK7Q9Y2U2 307 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 COQ4Q9Y3A0 265 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 CBY1Q9Y3M2 126 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 MAB21L2Q9Y586 359 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 DGKBQ9Y6T7 804 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 NRCAMQ92823 1304 aa4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF646O15015 1829 aaPredicted RBP4.34□□□□□ -1.71
PDLIM5-211ENST00000508531 MAST2Q6P0Q8 1798 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 COL4A1P02462 1669 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 TRAV6A0A075B6T7 132 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 A8MU76 341 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 E5RI56 91 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 KCNK1O00180 336 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 PDHXO00330 501 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 EI24O14681 340 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 MRASO14807 208 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 CHMP2AO43633 222 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 ZBTB14O43829 449 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 HCN1O60741 890 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 VPS26AO75436 327 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 TIPRLO75663 272 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 CRTAPO75718 401 aaPredicted RBP4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 GOT2P00505 430 aaKnown RBP4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 HRGP04196 525 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 IL6P05231 212 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 RPLP0P05388 317 aaKnown RBP4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 HMBSP08397 361 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 HOXD4P09016 255 aaPredicted RBP4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 UNGP13051 313 aaPredicted RBP4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 ICAM2P13598 275 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 NCF1P14598 390 aaPredicted RBP4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 MYL9P24844 172 aa4.33□□□□□ -1.72
PDLIM5-211ENST00000508531 ARRB2P32121 409 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms