RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 NAALAD2Q9Y3Q0 740 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 TTLL3Q9Y4R7 772 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 KDM3BQ7LBC6 1761 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 SPTBN4Q9H254 2564 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 ABCC12Q96J65 1359 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 RAB3GAP2Q9H2M9 1393 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 C5orf42Q9H799 3197 aa3.88□□□□□ -1.79
TOPBP1-206ENST00000508524 ZNF609O15014 1411 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 CHD8Q9HCK8 2581 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 YDJCA8MPS7 323 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 SP9P0CG40 484 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 KRT20P35900 424 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 NPY4RP50391 375 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 BACE1P56817 501 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 POU5F1Q01860 360 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 ZRANB3Q5FWF4 1079 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 NHLRC3Q5JS37 347 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 FHL5Q5TD97 284 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 TMEM182Q6ZP80 229 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 HIPK1Q86Z02 1210 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 LRRC49Q8IUZ0 686 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 C11orf42Q8N5U0 333 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 CCDC191Q8NCU4 936 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 OR1B1Q8NGR6 318 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 GUCD1Q96NT3 240 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 TNFRSF13CQ96RJ3 184 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 APOL2Q9BQE5 337 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 MGME1Q9BQP7 344 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 OR10A4Q9H209 315 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 CHCHD3Q9NX63 227 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 NOCTQ9UK39 431 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 PKD1L2Q7Z442 2459 aa3.87□□□□□ -1.79
TOPBP1-206ENST00000508524 ZSWIM8A7E2V4 1837 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 ANKRD34CP0C6C1 535 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 FDPSP14324 419 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 PDGFRAP16234 1089 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 TIA1P31483 386 aaKnown RBP eCLIP3.86□□□□□ -1.791e-6■■■■□ 21.9
TOPBP1-206ENST00000508524 NDPQ00604 133 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 CCL14Q16627 93 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 ECSCRQ19T08 205 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 C1orf141Q5JVX7 400 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 FAM91A1Q658Y4 838 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 SLC27A4Q6P1M0 643 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 ZNF530Q6P9A1 599 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 C17orf107Q6ZR85 190 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 SERINC5Q86VE9 423 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 BANPQ8N9N5 519 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 Q8NFD4 153 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 RFT1Q96AA3 541 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 PLEKHA3Q9HB20 300 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 TERF2IPQ9NYB0 399 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 USP34Q70CQ2 3546 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 CHD7Q9P2D1 2997 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 CHD6Q8TD26 2715 aa3.86□□□□□ -1.79
TOPBP1-206ENST00000508524 DUOX1Q9NRD9 1551 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 UNC79Q9P2D8 2635 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 UBR2Q8IWV8 1755 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 IGLON5A6NGN9 336 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 GBAP04062 536 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 KRT3P12035 628 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 SRD5A2P31213 254 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 RPL9P32969 192 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 MATKP42679 507 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 OR3A1P47881 315 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 LINC00242Q5T6M2 205 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 TDHQ8IZJ6 230 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 Q8N7P7 452 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 KIAA1524Q8TCG1 905 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 LIPHQ8WWY8 451 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 SMPDL3AQ92484 453 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 FAM122AQ96E09 287 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 CYYR1Q96J86 154 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 RADILQ96JH8 1075 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 SERAC1Q96JX3 654 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 RUNDC3BQ96NL0 473 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 RCHY1Q96PM5 261 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 NACAP1Q9BZK3 213 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 ABCD2Q9UBJ2 740 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 NIP7Q9Y221 180 aaKnown RBP eCLIP3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 PCDHGA1Q9Y5H4 931 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 ZDBF2Q9HCK1 2354 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 KIF24Q5T7B8 1368 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 BAHCC1Q9P281 2608 aa3.85□□□□□ -1.79
TOPBP1-206ENST00000508524 ZFHX4Q86UP3 3567 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 ANKRD11Q6UB99 2663 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 A0A0B4J203 849 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 LOC390937A0A1W2PQ73 354 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 FAM168BA1KXE4 195 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 TSPY2A6NKD2 308 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 FBP2O00757 339 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 ACSL4O60488 711 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 FGF19O95750 216 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 ANPEPP15144 967 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 ZNF41P51814 821 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 RPP38P78345 283 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 CDO1Q16878 200 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 SHEQ5VZ18 495 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 PLPP4Q5VZY2 271 aa3.84□□□□□ -1.79
TOPBP1-206ENST00000508524 NEPROQ6NW34 567 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms