RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CDK15Q96Q40 435 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 SMC6Q96SB8 1091 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 CNPPD1Q9BV87 410 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 ERVK-6Q9BXR3 956 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 FUT8Q9BYC5 575 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 CDC42EP4Q9H3Q1 356 aaKnown RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 ZNF703Q9H7S9 590 aaPredicted RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 SEMA4BQ9NPR2 832 aaPredicted RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 PNPLA3Q9NST1 481 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 ZNF358Q9NW07 568 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 LYARQ9NX58 379 aaKnown RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 PSD3Q9NYI0 1048 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 TNFRSF10DQ9UBN6 386 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 ERVK-19Q9WJR5 959 aa12□□□□□ -0.49
HMGCS1-205ENST00000508319 TNPO3Q9Y5L0 923 aaKnown RBP12□□□□□ -0.49
HMGCS1-205ENST00000508319 NKX2-6A6NCS4 301 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 LRRC3CA6NJW4 275 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 FOXE1O00358 373 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 SEMA3DO95025 777 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 FBXO45P0C2W1 286 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 FAM58BPP0C7Q3 252 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 POU3F2P20265 443 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 ENDOUP21128 410 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 ACVR2AP27037 513 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 CHRNB4P30926 498 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 NEK2P51955 445 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 SLC37A1P57057 533 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 NUP107P57740 925 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 PMPCAQ10713 525 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 ZNF267Q14586 743 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 EBPQ15125 230 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 GXYLT1Q4G148 440 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 PRAMEF20Q5VT98 475 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 SLC22A10Q63ZE4 541 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 CYP20A1Q6UW02 462 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 MEX3BQ6ZN04 569 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 OR5M9Q8NGP3 310 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 OR5M3Q8NGP4 307 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 LILRB4Q8NHJ6 448 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 ASB5Q8WWX0 329 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 UCN3Q969E3 161 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 NSUN5Q96P11 429 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 GAL3ST4Q96RP7 486 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 PELOQ9BRX2 385 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 WWTR1Q9GZV5 400 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 VPS11Q9H270 941 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 NOL11Q9H8H0 719 aaKnown RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 PROK2Q9HC23 129 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 TEX10Q9NXF1 929 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 XPR1Q9UBH6 696 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 PCTPQ9UKL6 214 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 FAM215AQ9Y5M1 114 aa11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 CHCHD2Q9Y6H1 151 aaPredicted RBP11.99□□□□□ -0.49
HMGCS1-205ENST00000508319 FREM3P0C091 2139 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 ATP6AP2A0A1C7CYW4 349 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 A0A1W2PS29 197 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 FIGNL2A6NMB9 653 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 FAM90A27PA6NNH2 459 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 AQP7O14520 342 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 BCKDKO14874 412 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 OR10H2O60403 315 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 ATP6AP2O75787 350 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 TOXO94900 526 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 CLDN9O95484 217 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 ACSL3O95573 720 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 GBAP04062 536 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 MSX1P28360 303 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 ECHS1P30084 290 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 KCNJ2P63252 427 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 TRAF3Q13114 568 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 RTL6Q6ICC9 239 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 OR52E8Q6IFG1 317 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 RNF111Q6ZNA4 994 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 ACAD11Q709F0 780 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 SLC29A4Q7RTT9 530 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 CCDC71Q8IV32 467 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 FBXW8Q8N3Y1 598 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 SLC15A4Q8N697 577 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 ZNF441Q8N8Z8 693 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 OR10G3Q8NGC4 313 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 RIT1Q92963 219 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 PHF21BQ96EK2 531 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 C16orf45Q96MC5 204 aaPredicted RBP11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 PAFAH2Q99487 392 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 NTMT1Q9BV86 223 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 UCK2Q9BZX2 261 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 ZBTB26Q9HCK0 441 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 MTRF1LQ9UGC7 380 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 DMGDHQ9UI17 866 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 ARHGAP21Q5T5U3 1957 aa11.98□□□□□ -0.49
HMGCS1-205ENST00000508319 MTORP42345 2549 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 IQANK1A0A1B0GTG1 560 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 A0A1B0GTL3 188 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 OR6C76A6NM76 312 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 STX16-NPEPL1H3BU86 382 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 STX16O14662 325 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 PGRMC2O15173 223 aa11.97□□□□□ -0.49
HMGCS1-205ENST00000508319 SUSD5O60279 629 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms