RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 ZFP36L2P47974 494 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 ARFIP1P53367 373 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 ALDH18A1P54886 795 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 GUCY2DQ02846 1103 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 MYBPHQ13203 477 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 BIKQ13323 160 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 GTF2H2Q13888 395 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 EBPQ15125 230 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 CPSF6Q16630 551 aaKnown RBP eCLIP10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 FAM83EQ2M2I3 478 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 SPRED3Q2MJR0 410 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 MRM1Q6IN84 353 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 GTF2H2CQ6P1K8 395 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC29A4Q7RTT9 530 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 GOLGA7Q7Z5G4 137 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 TMEM200AQ86VY9 491 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 FBXW8Q8N3Y1 598 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC15A4Q8N697 577 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 FAM13CQ8NE31 585 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 OR10G3Q8NGC4 313 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 UCN3Q969E3 161 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 REPS1Q96D71 796 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 WWTR1Q9GZV5 400 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC6A15Q9H2J7 730 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 PROK2Q9HC23 129 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 LYARQ9NX58 379 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 CPSF2Q9P2I0 782 aaKnown RBP10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 Q9UFV3 132 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 KCNN3Q9UGI6 736 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 BOKQ9UMX3 212 aaPredicted RBP10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 ASB4Q9Y574 426 aa10.63□□□□□ -0.71
HMGCS1-204ENST00000507293 A0A096LPK6 155 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 HMX2A2RU54 273 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 UGDHO60701 494 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 SIX3O95343 332 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 GPR75O95800 540 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 AIFM1O95831 613 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 CLPSP04118 112 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 FBXO45P0C2W1 286 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 FAM58BPP0C7Q3 252 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 PTX3P26022 381 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 SERPINB3P29508 390 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 CASQ1P31415 396 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 BSGP35613 385 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 PIK3CGP48736 1102 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC37A1P57057 533 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 TBL3Q12788 808 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 CUL3Q13618 768 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 ACAP2Q15057 778 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 PCBP2Q15366 365 aaKnown RBP eCLIP10.62□□□□□ -0.711e-6■■■■■ 27.4
HMGCS1-204ENST00000507293 UAP1Q16222 522 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 CYP20A1Q6UW02 462 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 SPNS3Q6ZMD2 512 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 CCDC91Q7Z6B0 441 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 NUDT13Q86X67 352 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 LIX1LQ8IVB5 337 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 DND1Q8IYX4 353 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 CLYBLQ8N0X4 340 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 LRRC25Q8N386 305 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 RIT1Q92963 219 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 JSRP1Q96MG2 331 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 DDX31Q9H8H2 851 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 IPPKQ9H8X2 491 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 WDR41Q9HAD4 459 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 ZFP64Q9NPA5 681 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 ALKBH4Q9NXW9 302 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 CNIH4Q9P003 139 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 CNOT11Q9UKZ1 510 aaKnown RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 RNF11Q9Y3C5 154 aa10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 CHCHD2Q9Y6H1 151 aaPredicted RBP10.62□□□□□ -0.71
HMGCS1-204ENST00000507293 A0A1W2PS29 197 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 ESYT3A0FGR9 886 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 CCDC189A1A4V9 331 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 OR6C76A6NM76 312 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 KLHL2O95198 593 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 GBAP04062 536 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 GABRA1P14867 456 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 SSTR4P31391 388 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 ARL1P40616 181 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 SERPINB8P50452 374 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 NEK2P51955 445 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 DLX5P56178 289 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC7A5Q01650 507 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 NTRK2Q16620 822 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 TECRLQ5HYJ1 363 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 UBAP2Q5T6F2 1119 aaKnown RBP10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 CES4AQ5XG92 561 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 OR52E8Q6IFG1 317 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 KLC3Q6P597 504 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 TMEM64Q6YI46 380 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 WDR53Q7Z5U6 358 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 C17orf53Q8N3J3 647 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 PTGR2Q8N8N7 351 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 L3MBTL4Q8NA19 623 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 WDR20Q8TBZ3 569 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 ZNF597Q96LX8 424 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 GPR78Q96P69 363 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 CDK15Q96Q40 435 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 DOHHQ9BU89 302 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 VPS11Q9H270 941 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms