RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 NSDHLQ15738 373 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 ANXA8L1Q5VT79 327 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 ANKRD37Q7Z713 158 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 SAMD14Q8IZD0 417 aaPredicted RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 NATD1Q8N6N6 113 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 IL22RA1Q8N6P7 574 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 OR9A2Q8NGT5 310 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 DOK4Q8TEW6 326 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 GTF2H4Q92759 462 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 PPWD1Q96BP3 646 aaKnown RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 RCN3Q96D15 328 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 ZBED6CLQ96FA7 236 aaPredicted RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 CCDC115Q96NT0 180 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 NPAS2Q99743 824 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 SLC6A13Q9NSD5 602 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 SIRT3Q9NTG7 399 aaPredicted RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 ACSS1Q9NUB1 689 aaPredicted RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 TAGLN3Q9UI15 199 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 BTNL2Q9UIR0 455 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 LEF1Q9UJU2 399 aaPredicted RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 MAN2B2Q9Y2E5 1009 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 NDUFAF1Q9Y375 327 aa13.28□□□□□ -0.28
RNF4-208ENST00000507247 MRPS18BQ9Y676 258 aaKnown RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 MAP1BP46821 2468 aaKnown RBP13.28□□□□□ -0.28
RNF4-208ENST00000507247 BBIP1A8MTZ0 92 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 A8MUA0 341 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 C21orf140B9A014 251 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 MRASO14807 208 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 ANGPT2O15123 496 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 CPSF4O95639 269 aaKnown RBP13.27□□□□□ -0.29
RNF4-208ENST00000507247 ATP1B1P05026 303 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 CYC1P08574 325 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 CD63P08962 238 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 CT62P0C5K7 136 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 SLC35E2P0CK97 266 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 HOXB9P17482 250 aaPredicted RBP13.27□□□□□ -0.29
RNF4-208ENST00000507247 PTPN4P29074 926 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 STT3AP46977 705 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 CDK9P50750 372 aaKnown RBP13.27□□□□□ -0.29
RNF4-208ENST00000507247 MANFP55145 182 aaKnown RBP13.27□□□□□ -0.29
RNF4-208ENST00000507247 RPS15P62841 145 aaKnown RBP13.27□□□□□ -0.29
RNF4-208ENST00000507247 HBA1P69905 142 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 HSPB3Q12988 150 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 SRSF6Q13247 344 aaKnown RBP13.27□□□□□ -0.29
RNF4-208ENST00000507247 MLC1Q15049 377 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 MAPKAPK3Q16644 382 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 GTDC1Q4AE62 458 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 TMEM205Q6UW68 189 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 DNAJC14Q6Y2X3 702 aaPredicted RBP13.27□□□□□ -0.29
RNF4-208ENST00000507247 ST13P4Q8IZP2 240 aaPredicted RBP13.27□□□□□ -0.29
RNF4-208ENST00000507247 ADCY4Q8NFM4 1077 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 OR4A15Q8NGL6 344 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 ZFP28Q8NHY6 868 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 OR5P2Q8WZ92 322 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 CMTM5Q96DZ9 223 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 DGAT2Q96PD7 388 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 CXorf36Q9H7Y0 433 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 RMND5AQ9H871 391 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 PNO1Q9NRX1 252 aaKnown RBP13.27□□□□□ -0.29
RNF4-208ENST00000507247 SLAMF8Q9P0V8 285 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 MAP10Q9P2G4 905 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 IL17BQ9UHF5 180 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 PADI2Q9Y2J8 665 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 PCDHGA6Q9Y5G7 932 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 AHCTF1Q8WYP5 2266 aa13.27□□□□□ -0.29
RNF4-208ENST00000507247 IGHV3-20A0A0C4DH32 117 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 C1QTNF9BB2RNN3 333 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 ACACBO00763 2458 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 TLX3O43711 291 aaPredicted RBP13.26□□□□□ -0.29
RNF4-208ENST00000507247 OR10H2O60403 315 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 IFNA16P05015 189 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 ABCB1P08183 1280 aaPredicted RBP13.26□□□□□ -0.29
RNF4-208ENST00000507247 C1QTNF9P0C862 333 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 TPRP12270 2363 aaKnown RBP13.26□□□□□ -0.29
RNF4-208ENST00000507247 LIFP15018 202 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 NT5EP21589 574 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 PTPN6P29350 595 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 MPIP34949 423 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 MGAT2Q10469 447 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 STX5Q13190 355 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 CLN3Q13286 438 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 IL10RAQ13651 578 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 ST3GAL2Q16842 350 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 SPRED3Q2MJR0 410 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 PRICKLE4Q2TBC4 344 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 MMEL1Q495T6 779 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 ZNF628Q5EBL2 1059 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 COQ5Q5HYK3 327 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 C6orf10Q5SRN2 563 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 FAM111BQ6SJ93 734 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 VASH2Q86V25 355 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 DPP10Q8N608 796 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 AMER2Q8N7J2 671 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 VPS37AQ8NEZ2 397 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 GOT1L1Q8NHS2 421 aaPredicted RBP13.26□□□□□ -0.29
RNF4-208ENST00000507247 KAT2AQ92830 837 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 C8orf44Q96CB5 159 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 NSL1Q96IY1 281 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 ITCHQ96J02 903 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 GPR87Q9BY21 358 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms