RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ATP6V0A1Q93050 837 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 CFAP36Q96G28 342 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 ZNF274Q96GC6 653 aaPredicted RBP5.05□□□□□ -1.6
HERC4-213ENST00000506515 LURAP1Q96LR2 239 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 MTHFD2LQ9H903 347 aaPredicted RBP5.05□□□□□ -1.6
HERC4-213ENST00000506515 MAGEF1Q9HAY2 307 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 B3GAT2Q9NPZ5 323 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 MIS18AQ9NYP9 233 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 AKAP7Q9P0M2 348 aaPredicted RBP5.05□□□□□ -1.6
HERC4-213ENST00000506515 MAD2L2Q9UI95 211 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 EXOC6BQ9Y2D4 811 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 SIPA1L3O60292 1781 aaPredicted RBP5.05□□□□□ -1.6
HERC4-213ENST00000506515 BRCA2P51587 3418 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 COL4A5P29400 1685 aa5.05□□□□□ -1.6
HERC4-213ENST00000506515 RANBP2P49792 3224 aaKnown RBP5.04□□□□□ -1.6
HERC4-213ENST00000506515 RTL9Q8NET4 1388 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 DDX60Q8IY21 1712 aaKnown RBP5.04□□□□□ -1.6
HERC4-213ENST00000506515 CCL15-CCL14A0A0B4J2E2 113 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 TMEM129A0AVI4 362 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 NKX6-3A6NJ46 265 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 CHUKO15111 745 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 B4GAT1O43505 415 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 SYT7O43581 403 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 PCCAP05165 728 aaPredicted RBP5.04□□□□□ -1.6
HERC4-213ENST00000506515 CHRNGP07510 517 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 NUDT17P0C025 328 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 ODC1P11926 461 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 C4BPBP20851 252 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 CYCSP99999 105 aaKnown RBP5.04□□□□□ -1.6
HERC4-213ENST00000506515 HYAL1Q12794 435 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 CBX3Q13185 183 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 GPR50Q13585 617 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 CCL15Q16663 113 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 ADAM5Q6NVV9 412 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 Q6ZVQ6 151 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 MOB2Q70IA6 237 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 DND1Q8IYX4 353 aaKnown RBP5.04□□□□□ -1.6
HERC4-213ENST00000506515 ZNF614Q8N883 585 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 ATP8B4Q8TF62 1192 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 OPTNQ96CV9 577 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 CNRIP1Q96F85 164 aaPredicted RBP5.04□□□□□ -1.6
HERC4-213ENST00000506515 PAPOLGQ9BWT3 736 aaKnown RBP5.04□□□□□ -1.6
HERC4-213ENST00000506515 PRO3102Q9H379 93 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 MED20Q9H944 212 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 BARHL2Q9NY43 387 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 TMOD2Q9NZR1 351 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 BAIAP2L1Q9UHR4 511 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 PILRAQ9UKJ1 303 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 MED23Q9ULK4 1368 aa5.04□□□□□ -1.6
HERC4-213ENST00000506515 A0A0U1RQG5 324 aaPredicted RBP5.03□□□□□ -1.6
HERC4-213ENST00000506515 GTPBP10A4D1E9 387 aaKnown RBP5.03□□□□□ -1.6
HERC4-213ENST00000506515 TCP10L2B9ZVM9 353 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 LMO7DNF2Z398 122 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 PSMD3O43242 534 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 VEGFDO43915 354 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 GMNNO75496 209 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 CEACAM4O75871 244 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 OLFM2O95897 454 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 CCL5P13501 91 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 TYMPP19971 482 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 ACKR3P25106 362 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 PDHA2P29803 388 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 ALKBH5Q6P6C2 394 aaKnown RBP5.03□□□□□ -1.6
HERC4-213ENST00000506515 PEX5LQ8IYB4 626 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 ELMOD1Q8N336 334 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 TRPV3Q8NET8 790 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 NUP37Q8NFH4 326 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 U2AF1L4Q8WU68 220 aaKnown RBP5.03□□□□□ -1.6
HERC4-213ENST00000506515 NR4A3Q92570 626 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 HAS2Q92819 552 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 GAL3ST4Q96RP7 486 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 ZNF665Q9H7R5 613 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 COMMD8Q9NX08 183 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 SH3GLB1Q9Y371 365 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 HTTP42858 3142 aa5.03□□□□□ -1.6
HERC4-213ENST00000506515 KDM3BQ7LBC6 1761 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 IGLV7-46A0A075B6I9 117 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 SLC15A5A6NIM6 579 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 CXCL11O14625 94 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 ZSCAN5DPP0CG00 497 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 THEGLP0DJG4 465 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 B4GALT1P15291 398 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 GPR183P32249 361 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 RIPK4P57078 832 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 EVCP57679 992 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 GALK2Q01415 458 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 PMP22Q01453 160 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 GFPT1Q06210 699 aaPredicted RBP5.02□□□□□ -1.61
HERC4-213ENST00000506515 GIT2Q14161 759 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 C3AR1Q16581 482 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 FKBP1CQ5VVH2 108 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 FRRS1Q6ZNA5 592 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 ARL10Q8N8L6 244 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 WDSUB1Q8N9V3 476 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 GPR148Q8TDV2 347 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 ZBED3Q96IU2 234 aaPredicted RBP5.02□□□□□ -1.61
HERC4-213ENST00000506515 GUCD1Q96NT3 240 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 ATP6V0BQ99437 205 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 OVOL2Q9BRP0 275 aa5.02□□□□□ -1.61
HERC4-213ENST00000506515 CCM2Q9BSQ5 444 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms