RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 NUMBP49757 651 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 TKTL1P51854 596 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 HSD17B7P56937 341 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 RIPK4P57078 832 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR1D5P58170 312 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC26A5P58743 744 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 HERV-K104P63124 156 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 MAP2K1Q02750 393 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 KLHL30Q0D2K2 578 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SRSF9Q13242 221 aaKnown RBP eCLIP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 GPR50Q13585 617 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF585BQ52M93 769 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ARHGEF16Q5VV41 709 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 LYPLAL1Q5VWZ2 237 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC35E4Q6ICL7 350 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 IRGCQ6NXR0 463 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 C19orf48Q6RUI8 117 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ABRAXAS1Q6UWZ7 409 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 TMEM64Q6YI46 380 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SH2D5Q6ZV89 423 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 MOB2Q70IA6 237 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 COPS6Q7L5N1 327 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC26A9Q7LBE3 791 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SYVN1Q86TM6 617 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SAMD14Q8IZD0 417 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ELMOD1Q8N336 334 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 CIARTQ8N365 385 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC43A2Q8N370 569 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF843Q8N446 348 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 TEX26Q8N6G2 289 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 CHURC1Q8WUH1 139 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ARHGAP45Q92619 1136 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 GLYATL1Q969I3 302 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC35C1Q96A29 364 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SYAP1Q96A49 352 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF274Q96GC6 653 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 MARK4Q96L34 752 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 GPR137Q96N19 417 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 NEDD4LQ96PU5 975 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 PCDHB18PQ96TA0 734 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SSX3Q99909 188 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 ASCL2Q99929 193 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 FTHL17Q9BXU8 183 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 NACA2Q9H009 215 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 DPEP3Q9H4B8 488 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 DDX28Q9NUL7 540 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SOHLH2Q9NX45 425 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 PLEK2Q9NYT0 353 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 COPS7AQ9UBW8 275 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 TRMT112Q9UI30 125 aaKnown RBP2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 PILRAQ9UKJ1 303 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 PLA2G4CQ9UP65 541 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 PPP2R2CQ9Y2T4 447 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 SH3TC1Q8TE82 1336 aa2.85□□□□□ -1.95
TRAPPC11-205ENST00000506426 A0A087WZ39 114 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 A0A1B0GUV1 79 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 FAM172BPA6NC97 362 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 MSGN1A6NI15 193 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 NKX6-3A6NJ46 265 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 SMIM1B2RUZ4 78 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 P2RY10O00398 339 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ECE2O60344 883 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 KRT36O76013 467 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 SEC24AO95486 1093 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 EML2O95834 649 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CLPTM1O96005 669 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 IFNB1P01574 187 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 FAM157CP0CG43 387 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CT45A8P0DMV1 189 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CT45A9P0DMV2 189 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ALDH3B1P43353 468 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 TNFRSF4P43489 277 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR3A2P47893 321 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CCR4P51679 360 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 GEMP55040 296 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 FOXG1P55316 489 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 KRTAP10-11P60412 298 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 PRKCEQ02156 737 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ARL16Q0P5N6 197 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CNTN1Q12860 1018 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 SPP2Q13103 211 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 TMEM132DQ14C87 1099 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 HEPACAMQ14CZ8 416 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 TEAD2Q15562 447 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CEBPEQ15744 281 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF672Q499Z4 452 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 GTDC1Q4AE62 458 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CT45A2Q5DJT8 189 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 C9orf50Q5SZB4 431 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 NKAIN2Q5VXU1 208 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 PLPP4Q5VZY2 271 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 HIST2H2AA3Q6FI13 130 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 GALNT17Q6IS24 598 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC25A47Q6Q0C1 308 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CEACAM20Q6UY09 585 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 LEKR1Q6ZMV7 388 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CDHR3Q6ZTQ4 885 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 USP50Q70EL3 339 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF771Q7L3S4 317 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms