RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 FAM87AP0C7U9 286 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 G6PDP11413 515 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 PRPS2P11908 318 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 ICAM2P13598 275 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 CPMP14384 443 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 DDX5P17844 614 aaKnown RBP12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 CSNK2A2P19784 350 aaPredicted RBP12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 NTSP30990 170 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 STT3AP46977 705 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 GYS2P54840 703 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 AP2B1P63010 937 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 RHDQ02161 417 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 PTGR1Q14914 329 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 ZNF750Q32MQ0 723 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 MAVSQ7Z434 540 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 LRRC25Q8N386 305 aaPredicted RBP12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 GALNT16Q8N428 558 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 RIT1Q92963 219 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 RNF166Q96A37 237 aaPredicted RBP12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 C11orf24Q96F05 449 aaPredicted RBP12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 MARK4Q96L34 752 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 RILPQ96NA2 401 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 TRIM55Q9BYV6 548 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 BRINP2Q9C0B6 783 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 KCNK13Q9HB14 408 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 FGFR1OP2Q9NVK5 253 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 GPR83Q9NYM4 423 aa12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 WBP11Q9Y2W2 641 aaKnown RBP12.52□□□□□ -0.41
PGGT1B-204ENST00000503638 A0A0G2JND7 137 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 TRBV11-1A0A0K0K1C0 115 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 A0A1W2PS29 197 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 ALPPP05187 535 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 SERPINA7P05543 415 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 SLC35E2P0CK97 266 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 PORP16435 677 aaPredicted RBP12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 PTGER1P34995 402 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 RPL3P39023 403 aaKnown RBP12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 DIO3P55073 304 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 SLC26A5P58743 744 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 BIKQ13323 160 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 ZNF267Q14586 743 aaPredicted RBP12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 PGS1Q32NB8 556 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 FAM71E1Q6IPT2 247 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 R3HCC1LQ7Z5L2 792 aaKnown RBP12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 SPATA19Q7Z5L4 167 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 GALNT12Q8IXK2 581 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 SAMD14Q8IZD0 417 aaPredicted RBP12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 ST13P4Q8IZP2 240 aaPredicted RBP12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 FAM9CQ8IZT9 166 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 SIRT6Q8N6T7 355 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 SNRNP27Q8WVK2 155 aaKnown RBP12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 FCRL1Q96LA6 429 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 OR52B2Q96RD2 323 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 PRPF18Q99633 342 aaKnown RBP12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 SLC25A23Q9BV35 468 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 DPY30Q9C005 99 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 LHPPQ9H008 270 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 REEP4Q9H6H4 257 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 TCF7L2Q9NQB0 619 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 SLC35C2Q9NQQ7 365 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 EHD3Q9NZN3 535 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 PTGFRNQ9P2B2 879 aa12.51□□□□□ -0.41
PGGT1B-204ENST00000503638 E9PBE3 544 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 J3QKU1 62 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 UBDO15205 165 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 PDPK1O15530 556 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 KLHL41O60662 606 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 TGDSO95455 350 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 PRR35P0CG20 571 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 PRPS1L1P21108 318 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 MPIP34949 423 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 GPC1P35052 558 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 IDH3AP50213 366 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 NCBP2P52298 156 aaKnown RBP eCLIP12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 STX1BP61266 288 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 KCNAB2Q13303 367 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 LY6DQ14210 128 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 SMU1Q2TAY7 513 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 CPTPQ5TA50 214 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 PLAG1Q6DJT9 500 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 EPGNQ6UW88 154 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 LARP4Q71RC2 724 aaKnown RBP eCLIP12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 APLFQ8IW19 511 aaPredicted RBP12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 CCDC116Q8IYX3 515 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 KRTCAP2Q8N6L1 136 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 AMER2Q8N7J2 671 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 B3GNT7Q8NFL0 401 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 ADCY4Q8NFM4 1077 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 CEP70Q8NHQ1 597 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 RFWD2Q8NHY2 731 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 SLC2A12Q8TD20 617 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 BRIX1Q8TDN6 353 aaKnown RBP12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 NCLNQ969V3 563 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 VMP1Q96GC9 406 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 ART5Q96L15 291 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 ZBTB18Q99592 522 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 WDR77Q9BQA1 342 aaPredicted RBP12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 FAM107BQ9H098 131 aa12.5□□□□□ -0.41
PGGT1B-204ENST00000503638 ATAD3AQ9NVI7 634 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms