RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 ITGAMP11215 1152 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 G6PDP11413 515 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 PCSK2P16519 638 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 CSNK2A2P19784 350 aaPredicted RBP13.22□□□□□ -0.29
RNF4-202ENST00000502316 ITGA3P26006 1051 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 DIO3P55073 304 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 DUSP2Q05923 314 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 PRSS53Q2L4Q9 553 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 ZNF750Q32MQ0 723 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 H3F3CQ6NXT2 135 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 RIMKLAQ8IXN7 391 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 LRRC25Q8N386 305 aaPredicted RBP13.22□□□□□ -0.29
RNF4-202ENST00000502316 CLHC1Q8NHS4 586 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 RIT1Q92963 219 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 EXOSC8Q96B26 276 aaKnown RBP13.22□□□□□ -0.29
RNF4-202ENST00000502316 PPWD1Q96BP3 646 aaKnown RBP13.22□□□□□ -0.29
RNF4-202ENST00000502316 FBXL20Q96IG2 436 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 UBL7Q96S82 380 aaPredicted RBP13.22□□□□□ -0.29
RNF4-202ENST00000502316 SMAD5Q99717 465 aaKnown RBP13.22□□□□□ -0.29
RNF4-202ENST00000502316 ARHGAP9Q9BRR9 750 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 NUDT9Q9BW91 350 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 ZNF552Q9H707 407 aaPredicted RBP13.22□□□□□ -0.29
RNF4-202ENST00000502316 CXorf21Q9HAI6 301 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 GPR83Q9NYM4 423 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 ATP6V1HQ9UI12 483 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 ZNF223Q9UK11 482 aaPredicted RBP13.22□□□□□ -0.29
RNF4-202ENST00000502316 CFAP46Q8IYW2 2715 aa13.22□□□□□ -0.29
RNF4-202ENST00000502316 GOLGA8QA0A0J9YX86 632 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 GOLGA8OA6NCC3 632 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 A6NL46 340 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 MYO1GB0I1T2 1018 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 GOLGA8NF8WBI6 632 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 SCAMP2O15127 329 aaKnown RBP13.21□□□□□ -0.29
RNF4-202ENST00000502316 DYRK3O43781 588 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 LRATO95237 230 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 TNNI3P19429 210 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 PRPS1L1P21108 318 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 SOX11P35716 441 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 HPCAL1P37235 193 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 RPL3P39023 403 aaKnown RBP13.21□□□□□ -0.29
RNF4-202ENST00000502316 FEN1P39748 380 aaKnown RBP13.21□□□□□ -0.29
RNF4-202ENST00000502316 CLDN8P56748 225 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 IRAK1BP1Q5VVH5 260 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 TCTN3Q6NUS6 607 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 FAM180BQ6P0A1 224 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 R3HCC1LQ7Z5L2 792 aaKnown RBP13.21□□□□□ -0.29
RNF4-202ENST00000502316 SPATA19Q7Z5L4 167 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 GALNT12Q8IXK2 581 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 FAM9CQ8IZT9 166 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 ARMC10Q8N2F6 343 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 EXD3Q8N9H8 876 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 LSM14AQ8ND56 463 aaKnown RBP13.21□□□□□ -0.29
RNF4-202ENST00000502316 OR1N1Q8NGS0 311 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 CEP70Q8NHQ1 597 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 SUN3Q8TAQ9 357 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 SLC2A12Q8TD20 617 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 BRIX1Q8TDN6 353 aaKnown RBP13.21□□□□□ -0.29
RNF4-202ENST00000502316 ZNF721Q8TF20 911 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 GFM2Q969S9 779 aaKnown RBP13.21□□□□□ -0.29
RNF4-202ENST00000502316 NCLNQ969V3 563 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 VMP1Q96GC9 406 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 ABHD17AQ96GS6 310 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 SENP5Q96HI0 755 aaPredicted RBP13.21□□□□□ -0.29
RNF4-202ENST00000502316 ART5Q96L15 291 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 OR52B2Q96RD2 323 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 SIKE1Q9BRV8 207 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 SLC25A23Q9BV35 468 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 GIMAP4Q9NUV9 329 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 G3BP2Q9UN86 482 aaKnown RBP13.21□□□□□ -0.29
RNF4-202ENST00000502316 ENTPD4Q9Y227 616 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 PCDHGB7Q9Y5F8 929 aa13.21□□□□□ -0.29
RNF4-202ENST00000502316 SPENQ96T58 3664 aaKnown RBP13.2□□□□□ -0.3
RNF4-202ENST00000502316 SPTA1P02549 2419 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 GABRR3A8MPY1 467 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 ANKRD28O15084 1053 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 AKAP10O43572 662 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 DIAPH2O60879 1101 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 SFTPCP11686 197 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 MPIP34949 423 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 SOX18P35713 384 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 FRKP42685 505 aaPredicted RBP13.2□□□□□ -0.3
RNF4-202ENST00000502316 IDH3AP50213 366 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 CLCN2P51788 898 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 PGDP52209 483 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 AQP5P55064 265 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 MGAT2Q10469 447 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 FUT7Q11130 342 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 MAP4K2Q12851 820 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 RAPSNQ13702 412 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 MPEG1Q2M385 716 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 PRICKLE4Q2TBC4 344 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 ZNF385BQ569K4 471 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 CRB2Q5IJ48 1285 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 AGAP7PQ5VUJ5 663 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 IGFL2Q6UWQ7 119 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 CAMKMTQ7Z624 323 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 LGI4Q8N135 537 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 KIF2BQ8N4N8 673 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 OR8K3Q8NH51 312 aa13.2□□□□□ -0.3
RNF4-202ENST00000502316 ZNF675Q8TD23 568 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms