RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 AP3M1Q9Y2T2 418 aa5.04□□□□□ -1.6
HMGXB4-208ENST00000498325 WBP11Q9Y2W2 641 aaKnown RBP5.04□□□□□ -1.6
HMGXB4-208ENST00000498325 L3MBTL1Q9Y468 752 aa5.04□□□□□ -1.6
HMGXB4-208ENST00000498325 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
HMGXB4-208ENST00000498325 DOPEY2Q9Y3R5 2298 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 DOCK9Q9BZ29 2069 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CSMD1Q96PZ7 3565 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 C15orf38-AP3S2A0A0A6YYH1 394 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 A0A1W2PPV9 198 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 A0A1W2PR77 199 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TRBC2A0A5B9 178 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 MAGEB17A8MXT2 336 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TLR4O00206 839 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ANKRD28O15084 1053 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 SCAMP1O15126 338 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 OR1F1O43749 312 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ANP32DO95626 131 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CFIP05156 583 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ANXA4P09525 319 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CAPN3P20807 821 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 PRPS1L1P21108 318 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 HOXC12P31275 282 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ATXN3P54252 364 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 C21orf59P57076 290 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ACTR3P61158 418 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 HNRNPKP61978 463 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 AP2B1P63010 937 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 REEP5Q00765 189 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 RHDQ02161 417 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 LRRC74AQ0VAA2 488 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TRAP1Q12931 704 aaKnown RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 FZD2Q14332 565 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 KIR2DS3Q14952 304 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TESK1Q15569 626 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 MAPKAPK3Q16644 382 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 RNF151Q2KHN1 245 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TPRG1LQ5T0D9 272 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 DEPDC1Q5TB30 811 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 FAM219BQ5XKK7 198 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 AAGABQ6PD74 315 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 LAYNQ6UX15 382 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 PAGE2Q7Z2X7 111 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 R3HCC1LQ7Z5L2 792 aaKnown RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ADCK2Q7Z695 626 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ARPINQ7Z6K5 226 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 SLC9B2Q86UD5 537 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 GPR180Q86V85 440 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 NRROSQ86YC3 692 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ZNF808Q8N4W9 903 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 DPP10Q8N608 796 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 C1orf52Q8N6N3 182 aaKnown RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 LINC01555Q8NAE3 123 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TRPV3Q8NET8 790 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 VPS37AQ8NEZ2 397 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 OR4E2Q8NGC2 313 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 OR2A1Q8NGT9 310 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CCL4L1Q8NHW4 92 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CHTF18Q8WVB6 975 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 JADE3Q92613 823 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TESCQ96BS2 214 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 LRRC58Q96CX6 371 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CLIP3Q96DZ5 547 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 APIPQ96GX9 242 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ITCHQ96J02 903 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CLPTM1LQ96KA5 538 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 PRAP1Q96NZ9 151 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 SH3GL1Q99961 368 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ORAI3Q9BRQ5 295 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ZNF768Q9H5H4 540 aaKnown RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 XKR8Q9H6D3 395 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CPNE5Q9HCH3 593 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 SPAG4Q9NPE6 437 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 DMRT3Q9NQL9 472 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TAAR2Q9P1P5 351 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TMEM181Q9P2C4 612 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ZNF624Q9P2J8 865 aaPredicted RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CPNE7Q9UBL6 633 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 SPASTQ9UBP0 616 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 APOBEC3BQ9UH17 382 aaKnown RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 SLC7A8Q9UHI5 535 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 PILRBQ9UKJ0 227 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ICKQ9UPZ9 632 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 POMPQ9Y244 141 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 TMA7Q9Y2S6 64 aaKnown RBP5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 PCDHGA7Q9Y5G6 932 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 ENTPD2Q9Y5L3 495 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 NUMA1Q14980 2115 aa5.03□□□□□ -1.6
HMGXB4-208ENST00000498325 CREBBPQ92793 2442 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 GNG14A0A1W2PPG7 69 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ARHGAP10A1A4S6 786 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 CLEC18AA5D8T8 446 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 A6NCN8 305 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 A8MUI8 341 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 VILLO15195 856 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 RRP8O43159 456 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 AHCYL1O43865 530 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PCDH7O60245 1069 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ENTPD5O75356 428 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ERN1O75460 977 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms