RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 FBXO28Q9NVF7 368 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ANKRD10Q9NXR5 420 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CD300AQ9UGN4 299 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 NOCTQ9UK39 431 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 AJAP1Q9UKB5 411 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 MMP17Q9ULZ9 603 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ACANP16112 2415 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TRAV14DV4A0A0A6YYC5 116 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 IGHV4-61A0A0C4DH41 118 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 A0A0G2JMM0 328 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 A0A1W2PPB8 328 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 OR2A25A4D2G3 310 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ARRDC5A6NEK1 342 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 OR6C6A6NF89 314 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 C4orf47A7E2U8 309 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 FADS2P1A8MWK0 482 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 KIR3DP1A8MWS1 328 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SPINT2O43291 252 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GREM1O60565 184 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 AGFG2O95081 481 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MED26O95402 600 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 H6PDO95479 791 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CST1P01037 141 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 KNG1P01042 644 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 EPOP01588 193 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 S100A8P05109 93 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PET100P0DJ07 73 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MYCLP12524 364 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 GYPEP15421 78 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 IL1R2P27930 398 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 DUSP1P28562 367 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 LEPRP48357 1165 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 SEC24CP53992 1094 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 P2RX3P56373 397 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GEMIN4P57678 1058 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 SUMO2P61956 95 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 HIST1H3AP68431 136 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 NKX6-1P78426 367 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 FANCCQ00597 558 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 LIPEQ05469 1076 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PTPN11Q06124 597 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 INCA1Q0VD86 236 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GRM4Q14833 912 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 RAB41Q5JT25 222 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 C6orf10Q5SRN2 563 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ZFYVE27Q5T4F4 411 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MROH9Q5TGP6 573 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ATF7IP2Q5U623 682 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CST9LP1Q5W188 147 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ADALQ6DHV7 355 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 FAM171BQ6P995 826 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SLC27A1Q6PCB7 646 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ZNF704Q6ZNC4 412 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 Q6ZSR9 355 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 AAED1Q7RTV5 226 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CACNA2D3Q8IZS8 1091 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TMEM161BQ8NDZ6 487 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CNNM3Q8NE01 707 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 NUDT10Q8NFP7 164 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PUM2Q8TB72 1066 aaKnown RBP eCLIP1.34□□□□□ -2.192e-6■■■■□ 23.5
XRN1-214ENST00000498077 TMEM174Q8WUU8 243 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 RSC1A1Q92681 617 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 NUDT11Q96G61 164 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MARS2Q96GW9 593 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 EPSTI1Q96J88 318 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 PARK7Q99497 189 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 SHANK2-AS3Q9BTD1 123 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MMTAG2Q9BU76 263 aaKnown RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 MLST8Q9BVC4 326 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SAP130Q9H0E3 1048 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 OR51V1Q9H2C8 321 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 OR51J1Q9H342 316 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 KLHL31Q9H511 634 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GP6Q9HCN6 339 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 MKKSQ9NPJ1 570 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 TMEM45AQ9NWC5 275 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 UBAP1Q9NZ09 502 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SH3BP1Q9Y3L3 701 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 NFE2L3Q9Y4A8 694 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 WIPI2Q9Y4P8 454 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 FLG2Q5D862 2391 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 A0A0B4J203 849 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ANKRD33BA6NCL7 494 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TUBAL3A6NHL2 446 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 TRPC5OSA6NMA1 111 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ACOT7O00154 380 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ENC1O14682 589 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 HOXA3O43365 443 aaPredicted RBP1.34□□□□□ -2.19
XRN1-214ENST00000498077 SNAI2O43623 268 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SDC3O75056 442 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CCNDBP1O95273 360 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 INSP01308 110 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ANXA1P04083 346 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 AMY1AP04745 511 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SERPINA6P08185 405 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 KRT16P08779 473 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 GIMD1P0DJR0 217 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 SERPINA2P20848 420 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 CA6P23280 308 aa1.34□□□□□ -2.19
XRN1-214ENST00000498077 ACVRL1P37023 503 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms