RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 VNN3Q9NY84 501 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 MLXQ9UH92 298 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 NRBP1Q9UHY1 535 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 CLEC4EQ9ULY5 219 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 RNF24Q9Y225 148 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 OR1A2Q9Y585 309 aa2.48□□□□□ -2.01
SMC4-227ENST00000497984 TRIOBPQ9H2D6 2365 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 C13orf42A0A1B0GVH6 325 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 H0YIG0 161 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 TSC22D2O75157 780 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 DUSP11O75319 330 aaKnown RBP2.47□□□□□ -2.01
SMC4-227ENST00000497984 GLCEO94923 617 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 SLU7O95391 586 aaKnown RBP2.47□□□□□ -2.01
SMC4-227ENST00000497984 P4HA1P13674 534 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 GPX3P22352 226 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 ID1P41134 155 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 KCNJ1P48048 391 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 FNTAP49354 379 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 IST1P53990 364 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 SCARB2Q14108 478 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 CRMP1Q14194 572 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 EMC2Q15006 297 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 TYSND1Q2T9J0 566 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 C14orf28Q4W4Y0 310 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 C11orf88Q6PI97 169 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 TMED8Q6PL24 325 aaPredicted RBP2.47□□□□□ -2.01
SMC4-227ENST00000497984 TUSC5Q8IXB3 177 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 SLC22A18ASQ8N1D0 253 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 PCED1BQ96HM7 432 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 ZNF350Q9GZX5 532 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 NAPBQ9H115 298 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 ELL3Q9HB65 397 aaPredicted RBP2.47□□□□□ -2.01
SMC4-227ENST00000497984 ZCCHC17Q9NP64 241 aaKnown RBP2.47□□□□□ -2.01
SMC4-227ENST00000497984 ZNF446Q9NWS9 450 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 RSPH14Q9UHP6 348 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 KCNK6Q9Y257 313 aa2.47□□□□□ -2.01
SMC4-227ENST00000497984 FGD5Q6ZNL6 1462 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 IGHV3OR16-12A0A075B7B8 117 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 SLC33A1O00400 549 aaPredicted RBP2.46□□□□□ -2.02
SMC4-227ENST00000497984 LRRTM2O43300 516 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 TSPAN2O60636 221 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 ANXA9O76027 345 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 EPOP01588 193 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 HSP90AB1P08238 724 aaKnown RBP2.46□□□□□ -2.02
SMC4-227ENST00000497984 HSD17B1P14061 328 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 CALML3P27482 149 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 SNU13P55769 128 aaKnown RBP2.46□□□□□ -2.02
SMC4-227ENST00000497984 ERVPABLB-1P60509 514 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 ST8SIA6P61647 398 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 CDKL1Q00532 357 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 TSPY1Q01534 308 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 LCP2Q13094 533 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 STXBP2Q15833 593 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 CNPY1Q3B7I2 92 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 KBTBD12Q3ZCT8 623 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 FUT11Q495W5 492 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 C9orf129Q5T035 196 aaKnown RBP2.46□□□□□ -2.02
SMC4-227ENST00000497984 DDI2Q5TDH0 399 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 RHBDD2Q6NTF9 364 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 Q6ZRG5 221 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 GALNTL5Q7Z4T8 443 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 ITIH5Q86UX2 942 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 HOOK3Q86VS8 718 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 CLYBLQ8N0X4 340 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 NUP93Q8N1F7 819 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 CHDHQ8NE62 594 aaPredicted RBP2.46□□□□□ -2.02
SMC4-227ENST00000497984 TRPV3Q8NET8 790 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 OR4F5Q8NH21 305 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 VN1R17PQ8TDU5 208 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 AGPAT1Q99943 283 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 ST6GALNAC5Q9BVH7 336 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 UTP14AQ9BVJ6 771 aaKnown RBP2.46□□□□□ -2.02
SMC4-227ENST00000497984 Q9HAA7 133 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 IMPAD1Q9NX62 359 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 DNAJB9Q9UBS3 223 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 SEC14L4Q9UDX3 406 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 ITM2BQ9Y287 266 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 ATG4BQ9Y4P1 393 aa2.46□□□□□ -2.02
SMC4-227ENST00000497984 MEI4A8MW99 385 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 CRCPO75575 148 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 CYP3A5P20815 502 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 MAGEB1P43366 347 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 TNFSF10P50591 281 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 ASIC1P78348 528 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 PPP1R3AQ16821 1122 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 GBP6Q6ZN66 633 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 LINC00696Q6ZRV3 163 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 LAX1Q8IWV1 398 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 OR8H3Q8N146 312 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 THEM5Q8N1Q8 247 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 FBXO25Q8TCJ0 367 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 SLCO4A1Q96BD0 722 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 CAPNS2Q96L46 248 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 PANX3Q96QZ0 392 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 ACPTQ9BZG2 426 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 RNPEPL1Q9HAU8 725 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 PLSCR3Q9NRY6 295 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 TECRQ9NZ01 308 aaKnown RBP2.45□□□□□ -2.02
SMC4-227ENST00000497984 SEPT10Q9P0V9 454 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 EIF3KQ9UBQ5 218 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms