RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 HSP90AA5PQ58FG0 334 aa15.03■□□□□ -0
VIM-208ENST00000497849 BICRALQ6AI39 1079 aa15.03■□□□□ -0
VIM-208ENST00000497849 HEPHL1Q6MZM0 1159 aa15.03■□□□□ -0
VIM-208ENST00000497849 ABHD17CQ6PCB6 329 aa15.03■□□□□ -0
VIM-208ENST00000497849 C20orf204Q6ZNR8 217 aa15.03■□□□□ -0
VIM-208ENST00000497849 DGAT2L6Q6ZPD8 337 aa15.03■□□□□ -0
VIM-208ENST00000497849 VN1R5Q7Z5H4 357 aa15.03■□□□□ -0
VIM-208ENST00000497849 DND1Q8IYX4 353 aaKnown RBP15.03■□□□□ -0
VIM-208ENST00000497849 AGGF1Q8N302 714 aaeCLIP15.03■□□□□ -0
VIM-208ENST00000497849 GPATCH11Q8N954 259 aa15.03■□□□□ -0
VIM-208ENST00000497849 GABPB2Q8TAK5 448 aaPredicted RBP15.03■□□□□ -0
VIM-208ENST00000497849 ZPLD1Q8TCW7 415 aa15.03■□□□□ -0
VIM-208ENST00000497849 WFIKKN1Q96NZ8 548 aa15.03■□□□□ -0
VIM-208ENST00000497849 HS3ST6Q96QI5 342 aa15.03■□□□□ -0
VIM-208ENST00000497849 PIGQQ9BRB3 760 aa15.03■□□□□ -0
VIM-208ENST00000497849 TRIM54Q9BYV2 358 aa15.03■□□□□ -0
VIM-208ENST00000497849 REXO4Q9GZR2 422 aaKnown RBP15.03■□□□□ -0
VIM-208ENST00000497849 DPH5Q9H2P9 285 aa15.03■□□□□ -0
VIM-208ENST00000497849 PRDM7Q9NQW5 492 aa15.03■□□□□ -0
VIM-208ENST00000497849 KCNE2Q9Y6J6 123 aa15.03■□□□□ -0
VIM-208ENST00000497849 CR1P17927 2039 aa15.03■□□□□ -0
VIM-208ENST00000497849 ANKRD33BA6NCL7 494 aa15.02■□□□□ -0
VIM-208ENST00000497849 PABPN1LA6NDY0 278 aaKnown RBP15.02■□□□□ -0
VIM-208ENST00000497849 FAM187AA6NFU0 413 aa15.02■□□□□ -0
VIM-208ENST00000497849 GOLGA8MH3BSY2 632 aa15.02■□□□□ -0
VIM-208ENST00000497849 SOX30O94993 753 aa15.02■□□□□ -0
VIM-208ENST00000497849 RCBTB2O95199 551 aa15.02■□□□□ -0
VIM-208ENST00000497849 PAX1P15863 534 aa15.02■□□□□ -0
VIM-208ENST00000497849 SERPINB3P29508 390 aa15.02■□□□□ -0
VIM-208ENST00000497849 MC3RP41968 323 aa15.02■□□□□ -0
VIM-208ENST00000497849 MAGEA6P43360 314 aa15.02■□□□□ -0
VIM-208ENST00000497849 NAGLUP54802 743 aa15.02■□□□□ -0
VIM-208ENST00000497849 DMTNQ08495 405 aa15.02■□□□□ -0
VIM-208ENST00000497849 RCN2Q14257 317 aa15.02■□□□□ -0
VIM-208ENST00000497849 NTRK2Q16620 822 aa15.02■□□□□ -0
VIM-208ENST00000497849 ADNP2Q6IQ32 1131 aa15.02■□□□□ -0
VIM-208ENST00000497849 TRIM40Q6P9F5 258 aa15.02■□□□□ -0
VIM-208ENST00000497849 SBSNQ6UWP8 590 aa15.02■□□□□ -0
VIM-208ENST00000497849 PLXDC2Q6UX71 529 aa15.02■□□□□ -0
VIM-208ENST00000497849 TMIGD1Q6UXZ0 262 aa15.02■□□□□ -0
VIM-208ENST00000497849 MMGT1Q8N4V1 131 aa15.02■□□□□ -0
VIM-208ENST00000497849 CALML6Q8TD86 181 aa15.02■□□□□ -0
VIM-208ENST00000497849 DIO2Q92813 273 aa15.02■□□□□ -0
VIM-208ENST00000497849 ABTB1Q969K4 478 aaPredicted RBP15.02■□□□□ -0
VIM-208ENST00000497849 INTS12Q96CB8 462 aaKnown RBP15.02■□□□□ -0
VIM-208ENST00000497849 GNRHR2Q96P88 292 aa15.02■□□□□ -0
VIM-208ENST00000497849 IARS2Q9NSE4 1012 aaKnown RBP15.02■□□□□ -0
VIM-208ENST00000497849 KLHL28Q9NXS3 571 aa15.02■□□□□ -0
VIM-208ENST00000497849 C15orf41Q9Y2V0 281 aa15.02■□□□□ -0
VIM-208ENST00000497849 WIF1Q9Y5W5 379 aa15.02■□□□□ -0
VIM-208ENST00000497849 SDR42E2A6NKP2 422 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 EFCAB8A8MWE9 144 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 DNALI1O14645 258 aaPredicted RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 CLEC3AO75596 197 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 IFNA2P01563 188 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 ENO2P09104 434 aaPredicted RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 C1GALT1C1LP0DN25 315 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 CRYGSP22914 178 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 LOXP28300 417 aaPredicted RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 RPL21P46778 160 aaKnown RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 NR1H2P55055 460 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 IL2P60568 153 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 IGLV3-21P80748 117 aaPredicted RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 SARNPP82979 210 aaKnown RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 FAM27E3Q08E93 113 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 TNK1Q13470 666 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 RCAN2Q14206 197 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 SLBPQ14493 270 aaKnown RBP eCLIP15.01□□□□□ -0.01
VIM-208ENST00000497849 PPP1R3AQ16821 1122 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 WIPI1Q5MNZ9 446 aaPredicted RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 TBCELQ5QJ74 424 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 RNASEH2BQ5TBB1 312 aaKnown RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 SLCO4C1Q6ZQN7 724 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 ADGRE4PQ86SQ3 457 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 OR4N5Q8IXE1 308 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 C2CD4AQ8NCU7 369 aaPredicted RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 MAPK1IP1LQ8NDC0 245 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 TTLQ8NG68 377 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 PPWD1Q96BP3 646 aaKnown RBP15.01□□□□□ -0.01
VIM-208ENST00000497849 MARK4Q96L34 752 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 ZFP3Q96NJ6 502 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 MAPKAP1Q9BPZ7 522 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 TUBA1CQ9BQE3 449 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 PIGMQ9H3S5 423 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 ADGRE2Q9UHX3 823 aa15.01□□□□□ -0.01
VIM-208ENST00000497849 EXPH5Q8NEV8 1989 aa15□□□□□ -0.01
VIM-208ENST00000497849 FGF17O60258 216 aa15□□□□□ -0.01
VIM-208ENST00000497849 CYP4B1P13584 511 aa15□□□□□ -0.01
VIM-208ENST00000497849 CPOXP36551 454 aa15□□□□□ -0.01
VIM-208ENST00000497849 MSH2P43246 934 aa15□□□□□ -0.01
VIM-208ENST00000497849 STT3AP46977 705 aa15□□□□□ -0.01
VIM-208ENST00000497849 ZNF793Q6ZN11 406 aa15□□□□□ -0.01
VIM-208ENST00000497849 HIPK1Q86Z02 1210 aa15□□□□□ -0.01
VIM-208ENST00000497849 GCNT2Q8N0V5 402 aa15□□□□□ -0.01
VIM-208ENST00000497849 MEIOBQ8N635 442 aa15□□□□□ -0.01
VIM-208ENST00000497849 ZNF441Q8N8Z8 693 aa15□□□□□ -0.01
VIM-208ENST00000497849 NAT8LQ8N9F0 302 aa15□□□□□ -0.01
VIM-208ENST00000497849 DOK4Q8TEW6 326 aa15□□□□□ -0.01
VIM-208ENST00000497849 RILPQ96NA2 401 aa15□□□□□ -0.01
VIM-208ENST00000497849 GAL3ST4Q96RP7 486 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms