RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 ADCY4Q8NFM4 1077 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 OR9I1Q8NGQ6 314 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 OR9A2Q8NGT5 310 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 PTPMT1Q8WUK0 201 aaPredicted RBP11.12□□□□□ -0.63
CUX1-210ENST00000497815 STON2Q8WXE9 905 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 RIT1Q92963 219 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 NACC2Q96BF6 587 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 ZNF681Q96N22 645 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 PRPF18Q99633 342 aaKnown RBP11.12□□□□□ -0.63
CUX1-210ENST00000497815 PELOQ9BRX2 385 aaKnown RBP11.12□□□□□ -0.63
CUX1-210ENST00000497815 CNPPD1Q9BV87 410 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 OR8D2Q9GZM6 311 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 EPN3Q9H201 632 aa11.12□□□□□ -0.63
CUX1-210ENST00000497815 SDR39U1Q9NRG7 319 aaPredicted RBP11.12□□□□□ -0.63
CUX1-210ENST00000497815 COPG1Q9Y678 874 aaKnown RBP11.12□□□□□ -0.63
CUX1-210ENST00000497815 SAGE2PA6NJ88 616 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 A6NL46 340 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 MYO1GB0I1T2 1018 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 HRKO00198 91 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 DYRK3O43781 588 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 TBX19O60806 448 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 SHOX2O60902 331 aaPredicted RBP11.11□□□□□ -0.63
CUX1-210ENST00000497815 SLC22A3O75751 556 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 CT62P0C5K7 136 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 DDX5P17844 614 aaKnown RBP11.11□□□□□ -0.63
CUX1-210ENST00000497815 GPX3P22352 226 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 IL12AP29459 219 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 MPIP34949 423 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 DGKQP52824 942 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 C21orf58P58505 322 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 SLC26A5P58743 744 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 HSPB3Q12988 150 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 BIKQ13323 160 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 SQLEQ14534 574 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 ZNF267Q14586 743 aaPredicted RBP11.11□□□□□ -0.63
CUX1-210ENST00000497815 MPEG1Q2M385 716 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 FAM174BQ3ZCQ3 159 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 SPANXN4Q5MJ08 99 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 DCAF10Q5QP82 559 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 C6orf163Q5TEZ5 329 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 OR4F3Q6IEY1 312 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 SAMD14Q8IZD0 417 aaPredicted RBP11.11□□□□□ -0.63
CUX1-210ENST00000497815 ZNF321PQ8N8H1 164 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 SUN3Q8TAQ9 357 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 FER1L6-AS2Q96M78 137 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 TUBB6Q9BUF5 446 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 DUSP26Q9BV47 211 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 GLIPR2Q9H4G4 154 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 CLMPQ9H6B4 373 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 SLAMF7Q9NQ25 335 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 ATAD3AQ9NVI7 634 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 TAS2R7Q9NYW3 318 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 MAPRE3Q9UPY8 281 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 ERVK-19Q9WJR5 959 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 SCN2AQ99250 2005 aa11.11□□□□□ -0.63
CUX1-210ENST00000497815 AHCTF1Q8WYP5 2266 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 CCDC88CQ9P219 2028 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 A0A1W2PQ72 361 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 A0A1W2PRB8 838 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 SYNDIG1LA6NDD5 238 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 NR5A2O00482 541 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 SNX3O60493 162 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 DNAJB5O75953 348 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 ATP1B1P05026 303 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 S100A3P33764 101 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 KIR3DL1P43629 444 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 CCL11P51671 97 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 RRADP55042 308 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 MANFP55145 182 aaKnown RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 MRPS35P82673 323 aaKnown RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 Q0VFX4 171 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 RAPSNQ13702 412 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 UBAP2LQ14157 1087 aaKnown RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 EXT1Q16394 746 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 AGKQ53H12 422 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 METTL21CQ5VZV1 264 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 FAM111BQ6SJ93 734 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 ZNF551Q7Z340 670 aaPredicted RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 KBTBD2Q8IY47 623 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 KIF2BQ8N4N8 673 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 TMEM102Q8N9M5 508 aaPredicted RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 CLEC1AQ8NC01 280 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 C7orf57Q8NEG2 295 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 NFAM1Q8NET5 270 aaPredicted RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 B3GNT7Q8NFL0 401 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 OR14A16Q8NHC5 309 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 SLC2A12Q8TD20 617 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 KAT2AQ92830 837 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 DAZLQ92904 295 aaKnown RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 NCLNQ969V3 563 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 TESCQ96BS2 214 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 COQ8BQ96D53 544 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 ZBED6CLQ96FA7 236 aaPredicted RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 ZNF764Q96H86 408 aaPredicted RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 THOC3Q96J01 351 aaKnown RBP11.1□□□□□ -0.63
CUX1-210ENST00000497815 MAGED4Q96JG8 741 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 IMMP1LQ96LU5 166 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 AMDHD1Q96NU7 426 aa11.1□□□□□ -0.63
CUX1-210ENST00000497815 CCT8L2Q96SF2 557 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms