RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SAMD8Q96LT4 415 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 TAAR6Q96RI8 345 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 TNFRSF13CQ96RJ3 184 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 CBWD1Q9BRT8 395 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 SYT11Q9BT88 431 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 MOB1AQ9H8S9 216 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 WDR41Q9HAD4 459 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 HPF1Q9NWY4 346 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 THYN1Q9P016 225 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 ACTR3BQ9P1U1 418 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 PLA2G4CQ9UP65 541 aa3.35□□□□□ -1.87
SMC4-225ENST00000497203 A0A0U1RRA0 63 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 LOC390937A0A1W2PQ73 354 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 SH3PXD2BA1X283 911 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 ASB14A6NK59 587 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 C19orf81C9J6K1 198 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 TXNL1O43396 289 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 PDGFBP01127 241 aaPredicted RBP3.34□□□□□ -1.87
SMC4-225ENST00000497203 PROS1P07225 676 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 DPEP1P16444 411 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 TMOD1P28289 359 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 CCND2P30279 289 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 CAPGP40121 348 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 MATKP42679 507 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 MAGEA4P43358 317 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 SLC6A8P48029 635 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 VEGFCP49767 419 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 ZNF131P52739 623 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 RIDAP52758 137 aaKnown RBP3.34□□□□□ -1.87
SMC4-225ENST00000497203 NDST1P52848 882 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 NLRP11P59045 1033 aaKnown RBP3.34□□□□□ -1.87
SMC4-225ENST00000497203 NFATC2Q13469 925 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 SNX1Q13596 522 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 ZNF146Q15072 292 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 HAGHQ16775 308 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 MUC21Q5SSG8 566 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 TEX35Q5T0J7 233 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 FAM182AQ5T1J6 154 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 DCAF12Q5T6F0 453 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 LIPJQ5W064 366 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 FAM159AQ6UWV7 190 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 GPR142Q7Z601 462 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 ITIH5Q86UX2 942 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 KCNMB4Q86W47 210 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 CARM1Q86X55 608 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 FAM131BQ86XD5 332 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 RNF130Q86XS8 419 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 LINC00518Q8N0U6 118 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 RNF148Q8N7C7 305 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 BANPQ8N9N5 519 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 MLKLQ8NB16 471 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 Q8NBF4 154 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 PRSS33Q8NF86 280 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 DQX1Q8TE96 717 aaKnown RBP3.34□□□□□ -1.87
SMC4-225ENST00000497203 LRRC15Q8TF66 581 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 TMEM37Q8WXS4 190 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 TAF4BQ92750 862 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 TMEM45BQ96B21 275 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 C16orf58Q96GQ5 468 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 COG3Q96JB2 828 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 PRICKLE1Q96MT3 831 aaPredicted RBP3.34□□□□□ -1.87
SMC4-225ENST00000497203 NMNAT2Q9BZQ4 307 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 RAB17Q9H0T7 212 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 CXXC4Q9H2H0 198 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 FAM124BQ9H5Z6 455 aaPredicted RBP3.34□□□□□ -1.87
SMC4-225ENST00000497203 TMEM231Q9H6L2 316 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 IL1RAPQ9NPH3 570 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 DEPPQ9NTK1 212 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 NUDT4Q9NZJ9 180 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 ASIC3Q9UHC3 531 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 BCAP29Q9UHQ4 241 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 NIP7Q9Y221 180 aaKnown RBP eCLIP3.34□□□□□ -1.87
SMC4-225ENST00000497203 NUDCQ9Y266 331 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 ATG4BQ9Y4P1 393 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 KIF7Q2M1P5 1343 aa3.34□□□□□ -1.87
SMC4-225ENST00000497203 TMEM89A2RUT3 159 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 IGLON5A6NGN9 336 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 H7C423 109 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 PDHXO00330 501 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 SOCS3O14543 225 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 SH2D1BO14796 132 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 CFLARO15519 480 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 BUB1O43683 1085 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 SNAP91O60641 907 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 TRIM16O95361 564 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 GSTA1P08263 222 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 GP9P14770 177 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 AKT2P31751 481 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 MTIF2P46199 727 aaKnown RBP3.33□□□□□ -1.88
SMC4-225ENST00000497203 SLC26A5P58743 744 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 MYBPC1Q00872 1141 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 ELAVL2Q12926 359 aaKnown RBP3.33□□□□□ -1.88
SMC4-225ENST00000497203 KLF5Q13887 457 aaPredicted RBP3.33□□□□□ -1.88
SMC4-225ENST00000497203 BTG3Q14201 252 aaPredicted RBP3.33□□□□□ -1.88
SMC4-225ENST00000497203 C12orf60Q5U649 245 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 AGAP7PQ5VUJ5 663 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 RAET1GQ6H3X3 334 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 RHBDD2Q6NTF9 364 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 IRGCQ6NXR0 463 aa3.33□□□□□ -1.88
SMC4-225ENST00000497203 VPS36Q86VN1 386 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms