RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 FRG2CA6NGY1 282 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 EFCAB7A8K855 629 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 WDR46O15213 610 aaKnown RBP2.17□□□□□ -2.06
VPS26A-208ENST00000497022 GJB5O95377 273 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 APBB3O95704 486 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 HOXC4P09017 264 aaPredicted RBP2.17□□□□□ -2.06
VPS26A-208ENST00000497022 SNRPCP09234 159 aaKnown RBP2.17□□□□□ -2.06
VPS26A-208ENST00000497022 MMP10P09238 476 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 SLC35E2P0CK97 266 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 EZRP15311 586 aaKnown RBP2.17□□□□□ -2.06
VPS26A-208ENST00000497022 CASTP20810 708 aaKnown RBP2.17□□□□□ -2.06
VPS26A-208ENST00000497022 MFAP2P55001 183 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 STX17P56962 302 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 SLC34A1Q06495 639 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 KCTD2Q14681 263 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 P2RY14Q15391 338 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 OR1C1Q15619 314 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 ACKR1Q16570 336 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 WSCD2Q2TBF2 565 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 PAN3Q58A45 887 aaKnown RBP2.17□□□□□ -2.06
VPS26A-208ENST00000497022 IGFL3Q6UXB1 125 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 ITIH5Q86UX2 942 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 AQP12AQ8IXF9 295 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 SIX6OS1Q8N1H7 587 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 FBXW8Q8N3Y1 598 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 TRPV3Q8NET8 790 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 AFAP1L1Q8TED9 768 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 CRYGNQ8WXF5 182 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 FAM162AQ96A26 154 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 VSIG2Q96IQ7 327 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 CASD1Q96PB1 797 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 NUSAP1Q9BXS6 441 aaKnown RBP2.17□□□□□ -2.06
VPS26A-208ENST00000497022 RNF41Q9H4P4 317 aaPredicted RBP2.17□□□□□ -2.06
VPS26A-208ENST00000497022 TIGARQ9NQ88 270 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 VPS18Q9P253 973 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 GIMAP2Q9UG22 337 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 PSORS1C1Q9UIG5 152 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 POMT1Q9Y6A1 747 aa2.17□□□□□ -2.06
VPS26A-208ENST00000497022 ZNFX1Q9P2E3 1918 aaKnown RBP2.17□□□□□ -2.06
VPS26A-208ENST00000497022 TMEM129A0AVI4 362 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 SDR42E2A6NKP2 422 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 ZFP92A6NM28 416 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 A8MX80 341 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 CHUKO15111 745 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 ATP9AO75110 1047 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 DUSP14O95147 198 aaKnown RBP2.16□□□□□ -2.06
VPS26A-208ENST00000497022 GOT2P00505 430 aaKnown RBP2.16□□□□□ -2.06
VPS26A-208ENST00000497022 EPOP01588 193 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 PROS1P07225 676 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 SBK2P0C263 348 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 LAMP1P11279 417 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 MAGEB1P43366 347 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 CKAP4Q07065 602 aaKnown RBP2.16□□□□□ -2.06
VPS26A-208ENST00000497022 SCN1BQ07699 218 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 ACER2Q5QJU3 275 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 MPP7Q5T2T1 576 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 WSCD1Q658N2 575 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 Q6ZRG5 221 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 GLRX5Q86SX6 157 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 KLHDC8AQ8IYD2 350 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 Q8N9G6 341 aaPredicted RBP2.16□□□□□ -2.06
VPS26A-208ENST00000497022 FBXO25Q8TCJ0 367 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 FRAT1Q92837 279 aaPredicted RBP2.16□□□□□ -2.06
VPS26A-208ENST00000497022 SNRNP40Q96DI7 357 aaKnown RBP2.16□□□□□ -2.06
VPS26A-208ENST00000497022 RAB3CQ96E17 227 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 OR5M11Q96RB7 305 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 S1PR3Q99500 378 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 AGPAT1Q99943 283 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 EDEM3Q9BZQ6 932 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 Q9HAA7 133 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 GDF3Q9NR23 364 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 TECRQ9NZ01 308 aaKnown RBP2.16□□□□□ -2.06
VPS26A-208ENST00000497022 RAI14Q9P0K7 980 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 RPS6KB2Q9UBS0 482 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 PRODH2Q9UF12 536 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 CIDEBQ9UHD4 219 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 ERVK-19Q9WJR5 959 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 MTF2Q9Y483 593 aaPredicted RBP2.16□□□□□ -2.06
VPS26A-208ENST00000497022 CDC42BPBQ9Y5S2 1711 aa2.16□□□□□ -2.06
VPS26A-208ENST00000497022 MYO10Q9HD67 2058 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 SH3PXD2BA1X283 911 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 TRABD2BA6NFA1 517 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 K7ERI5 159 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 NME6O75414 186 aaPredicted RBP2.15□□□□□ -2.07
VPS26A-208ENST00000497022 CPNE6O95741 557 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 IGHV3-9P01782 118 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 ZNF32P17041 273 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 FRKP42685 505 aaPredicted RBP2.15□□□□□ -2.07
VPS26A-208ENST00000497022 HNRNPA3P51991 378 aaKnown RBP2.15□□□□□ -2.07
VPS26A-208ENST00000497022 ASAH1Q13510 395 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 SLC10A1Q14973 349 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 RHBDD2Q6NTF9 364 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 PET117Q6UWS5 81 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 NHLRC1Q6VVB1 395 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 MSANTD1Q6ZTZ1 278 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 APOBEC3FQ8IUX4 373 aaKnown RBP2.15□□□□□ -2.07
VPS26A-208ENST00000497022 LAX1Q8IWV1 398 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 CEND1Q8N111 149 aa2.15□□□□□ -2.07
VPS26A-208ENST00000497022 THEM5Q8N1Q8 247 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms