RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 ENTPD4Q9Y227 616 aa17.91■□□□□ 0.46
CTDSP1-213ENST00000496785 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.91■□□□□ 0.46
CTDSP1-213ENST00000496785 YARS2Q9Y2Z4 477 aaKnown RBP17.91■□□□□ 0.46
CTDSP1-213ENST00000496785 COPG1Q9Y678 874 aaKnown RBP17.91■□□□□ 0.46
CTDSP1-213ENST00000496785 ZNF462Q96JM2 2506 aa17.91■□□□□ 0.46
CTDSP1-213ENST00000496785 OR6C76A6NM76 312 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 ITGA10O75578 1167 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 CD46P15529 392 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 H2AFXP16104 143 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 MAPK1P28482 360 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 TRHRP34981 398 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 SSR4P51571 173 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 ABCE1P61221 599 aaKnown RBP17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 ERVK-8P63133 956 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 ZNF267Q14586 743 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 NOXRED1Q6NXP6 359 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 RNF111Q6ZNA4 994 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 SLC29A4Q7RTT9 530 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 TRIM42Q8IWZ5 723 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 GPALPP1Q8IXQ4 340 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 LRRC25Q8N386 305 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 TMEM156Q8N614 296 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 AMER2Q8N7J2 671 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 TMEM178AQ8NBL3 297 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 CATSPER1Q8NEC5 780 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 AGR3Q8TD06 166 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 ZNF721Q8TF20 911 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 TMEM125Q96AQ2 219 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 ZBTB9Q96C00 473 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 PPP3R2Q96LZ3 170 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 C5orf34Q96MH7 638 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 VIPAS39Q9H9C1 493 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 MYNNQ9NPC7 610 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 MIEF1Q9NQG6 463 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 LRFN1Q9P244 771 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 UTS2RQ9UKP6 389 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 CES1P1Q9UKY3 287 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 ERVK-19Q9WJR5 959 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 CCL27Q9Y4X3 112 aa17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 POLR3HQ9Y535 204 aaPredicted RBP17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 SMG1Q96Q15 3661 aaKnown RBP17.9■□□□□ 0.46
CTDSP1-213ENST00000496785 WASHC1A8K0Z3 465 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 PIP5K1BO14986 540 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 VPS4BO75351 444 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 F10P00742 488 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 IGKV3-11P04433 115 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 ATP1B1P05026 303 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 LINC00032P0C843 101 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 NT5EP21589 574 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 CD96P40200 585 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 HLCSP50747 726 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 RNF4P78317 190 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 FOXK1P85037 733 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 STX3Q13277 289 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 MPP2Q14168 576 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 OR1C1Q15619 314 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 FAM180AQ6UWF9 173 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 FAM98AQ8NCA5 519 aaKnown RBP17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 CDC26Q8NHZ8 85 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 NUBPLQ8TB37 319 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 THAP3Q8WTV1 239 aaPredicted RBP17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 TRIM4Q9C037 500 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 TUBB1Q9H4B7 451 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 TRIM45Q9H8W5 580 aaPredicted RBP17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 CXorf21Q9HAI6 301 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 MYOTQ9UBF9 498 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 VPS4AQ9UN37 437 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 RAP2CQ9Y3L5 183 aa17.89■□□□□ 0.45
CTDSP1-213ENST00000496785 TMEM233B4DJY2 109 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 LSM1O15116 133 aaKnown RBP17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 DDX5P17844 614 aaKnown RBP17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 DDCP20711 480 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 SLC1A6P48664 564 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 UGT3A2Q3SY77 523 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 ZNF766Q5HY98 468 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 Q6ZSR9 355 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 MDS2Q8NDY4 140 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 OR7G1Q8NGA0 311 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 RAB3IL1Q8TBN0 382 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 UCN3Q969E3 161 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 MIB2Q96AX9 1013 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 SNRNP40Q96DI7 357 aaKnown RBP17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 ZDHHC2Q9UIJ5 367 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 CFL2Q9Y281 166 aa17.88■□□□□ 0.45
CTDSP1-213ENST00000496785 A8MVJ9 347 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 MAN1A2O60476 641 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 RASAL1O95294 804 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 CRYABP02511 175 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 BGNP21810 368 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 FEN1P39748 380 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 ASMTP46597 345 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 HK2P52789 917 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 RPL38P63173 70 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 C2orf80Q0P641 193 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 KIAA0040Q15053 153 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 MPEG1Q2M385 716 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 ATP6AP1LQ52LC2 224 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 XKR7Q5GH72 579 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 ATG16L1Q676U5 607 aa17.87■□□□□ 0.45
CTDSP1-213ENST00000496785 OPN5Q6U736 354 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms