RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 STXBP1P61764 594 aaKnown RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 SYPL1Q16563 259 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 MOGQ16653 247 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF770Q6IQ21 691 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 BHLHB9Q6PI77 547 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 WASH2PQ6VEQ5 465 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 P2RY8Q86VZ1 359 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 CCDC103Q8IW40 242 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 DNAJC22Q8N4W6 341 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 OR5D16Q8NGK9 328 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 UTP15Q8TED0 518 aaKnown RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 LCN9Q8WX39 176 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 FCGR1BQ92637 280 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 MYDGFQ969H8 173 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 BORCS5Q969J3 196 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 MOAP1Q96BY2 351 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 COL21A1Q96P44 957 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 TREX2Q9BQ50 279 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 IMPAD1Q9NX62 359 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ZNF226Q9NYT6 803 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 TMCC3Q9ULS5 477 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 ATG4BQ9Y4P1 393 aa12.34□□□□□ -0.43
GARNL3-220ENST00000496711 GPC6Q9Y625 555 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-220ENST00000496711 GOLGA4Q13439 2230 aaKnown RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 PRAMEF27A3QJZ7 478 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 OR2A25A4D2G3 310 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 AXIN1O15169 862 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 ZBTB11O95625 1053 aaPredicted RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 EML2O95834 649 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 ADAP00813 363 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 NR2F1P10589 423 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 GABRB1P18505 474 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 AK4P27144 223 aaPredicted RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 TGM3Q08188 693 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 SFSWAPQ12872 951 aaKnown RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 DGCR6Q14129 220 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 TBCEQ15813 527 aaPredicted RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 ZNF829Q3KNS6 432 aaPredicted RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 TJAP1Q5JTD0 557 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 UBE2UQ5VVX9 321 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 KLHL17Q6TDP4 642 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 KIAA1324Q6UXG2 1013 aaKnown RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 DEF8Q6ZN54 512 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 FAM92BQ6ZTR7 304 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 PAQR7Q86WK9 346 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 TRIM69Q86WT6 500 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 KRT73Q86Y46 540 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 OR4E2Q8NGC2 313 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 VANGL1Q8TAA9 524 aaPredicted RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 BBS10Q8TAM1 723 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 SUN3Q8TAQ9 357 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 CNRIP1Q96F85 164 aaPredicted RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 DHRS1Q96LJ7 313 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 SYNPO2LQ9H987 977 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 CD93Q9NPY3 652 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 NECTIN3Q9NQS3 549 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 FKBP14Q9NWM8 211 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 FTSJ1Q9UET6 329 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 APOBEC3BQ9UH17 382 aaKnown RBP12.33□□□□□ -0.44
GARNL3-220ENST00000496711 KLF15Q9UIH9 416 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 FBXW2Q9UKT8 454 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 DUSP12Q9UNI6 340 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 CA5BQ9Y2D0 317 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 KLHL20Q9Y2M5 609 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 CEP290O15078 2479 aa12.33□□□□□ -0.44
GARNL3-220ENST00000496711 A0A0J9YVX5 310 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 TRBV4-1A0A0J9YWV2 114 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 WASHC1A8K0Z3 465 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 CLCA1A8K7I4 914 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 H0Y8X5 98 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 FAAHO00519 579 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 ZW10O43264 779 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 OXSR1O95747 527 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-220ENST00000496711 DRD1P21728 446 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 ELAVL4P26378 380 aaKnown RBP12.32□□□□□ -0.44
GARNL3-220ENST00000496711 CRISP3P54108 245 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 CDC42P60953 191 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 RAB8AP61006 207 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 RPS15AP62244 130 aaKnown RBP12.32□□□□□ -0.44
GARNL3-220ENST00000496711 TCEA2Q15560 299 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 GPR19Q15760 415 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 TPRG1LQ5T0D9 272 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 TCTN3Q6NUS6 607 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 SLC48A1Q6P1K1 146 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 RD3Q7Z3Z2 195 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 OR56A1Q8NGH5 318 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 XAGE5Q8WWM1 108 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 GAL3ST3Q96A11 431 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 MRGPRX1Q96LB2 322 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 RSPO3Q9BXY4 272 aaPredicted RBP12.32□□□□□ -0.44
GARNL3-220ENST00000496711 GIMAP4Q9NUV9 329 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 TBC1D23Q9NUY8 699 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 LYARQ9NX58 379 aaKnown RBP12.32□□□□□ -0.44
GARNL3-220ENST00000496711 PCOLCE2Q9UKZ9 415 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 PIAS3Q9Y6X2 628 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 DSPPQ9NZW4 1301 aa12.32□□□□□ -0.44
GARNL3-220ENST00000496711 ZAR1LA6NP61 321 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 FAM227AF5H4B4 570 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 BTN3A3O00478 584 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 PGRMC2O15173 223 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms