RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SLC38A3Q99624 504 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 YIPF4Q9BSR8 244 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 DOHHQ9BU89 302 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 SPATA5L1Q9BVQ7 753 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 NLNQ9BYT8 704 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 RNF32Q9H0A6 362 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 ABCG5Q9H222 651 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 HCSTQ9UBK5 93 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 WRBO00258 174 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 WWP2O00308 870 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 HLA-DQB2P05538 268 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 LPLP06858 475 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 RHCEP18577 417 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 CXCL3P19876 107 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 S100PP25815 95 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 NNMTP40261 264 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 PBX2P40425 430 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 GPR143P51810 404 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 AFF1P51825 1210 aaKnown RBP8.63□□□□□ -1.03
HPS4-217ENST00000496385 STC1P52823 247 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 HMGA2P52926 109 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 ABRAXAS2Q15018 415 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 TEAD4Q15561 434 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 NTRK2Q16620 822 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 SWI5Q1ZZU3 235 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 CCDC157Q569K6 752 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 NOMO2Q5JPE7 1267 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.63□□□□□ -1.03
HPS4-217ENST00000496385 METTL11BQ5VVY1 283 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 PSRC1Q6PGN9 363 aaPredicted RBP8.63□□□□□ -1.03
HPS4-217ENST00000496385 SPRED2Q7Z698 418 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 PDZD9Q8IXQ8 264 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 CMIPQ8IY22 773 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 LAS2Q8IYD9 372 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 OR52B6Q8NGF0 335 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 SH3RF2Q8TEC5 729 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 ATF6BQ99941 703 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 DUSP16Q9BY84 665 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 NKX6-2Q9C056 277 aaPredicted RBP8.63□□□□□ -1.03
HPS4-217ENST00000496385 HDHD2Q9H0R4 259 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 UCK1Q9HA47 277 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 SLC6A13Q9NSD5 602 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 FTSJ1Q9UET6 329 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 EIF2B4Q9UI10 523 aaKnown RBP8.63□□□□□ -1.03
HPS4-217ENST00000496385 ZNF451Q9Y4E5 1061 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 NME7Q9Y5B8 376 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 PCDHGA9Q9Y5G4 932 aaKnown RBP8.63□□□□□ -1.03
HPS4-217ENST00000496385 GBF1Q92538 1859 aa8.63□□□□□ -1.03
HPS4-217ENST00000496385 MYO9BQ13459 2157 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 TRDV1A0A1B0GX56 115 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 IRGMA1A4Y4 181 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 CDC7O00311 574 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 RFXANKO14593 260 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 FGF10O15520 208 aaPredicted RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 ADAM12O43184 909 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 EIF1BO60739 113 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 HPGDSO60760 199 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 EPOP01588 193 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 APOC3P02656 99 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 TCRBP04435 133 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 S100A9P06702 114 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 AHCYP23526 432 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 CSKP41240 450 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 EIF1P41567 113 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 PIK3CGP48736 1102 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 CXCR3P49682 368 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 ARSDP51689 593 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 ARHGDIBP52566 201 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 CRISP1P54107 249 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 NRG1Q02297 640 aaPredicted RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 RPL6Q02878 288 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 IL10RBQ08334 325 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 DOC2BQ14184 412 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 HFEQ30201 348 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 LIPKQ5VXJ0 399 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 MSANTD2Q6P1R3 559 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 C5orf46Q6UWT4 87 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 NLRC3Q7RTR2 1065 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 KANSL1Q7Z3B3 1105 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 PRICKLE2Q7Z3G6 844 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 ARHGAP12Q8IWW6 846 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 OR2T35Q8NGX2 323 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 OR52P1PQ8NH57 321 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 TM9SF4Q92544 642 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 IMP4Q96G21 291 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 LCORQ96JN0 433 aaPredicted RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 COLEC11Q9BWP8 271 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 CXCL16Q9H2A7 254 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 RNF39Q9H2S5 420 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 WDCPQ9H6R7 721 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 LRTM1Q9HBL6 345 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 KLK14Q9P0G3 267 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 EDARQ9UNE0 448 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 CORO2BQ9UQ03 480 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 GTPBP1O00178 669 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 CLIC1O00299 241 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 RAD1O60671 282 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 PRAF2O60831 178 aa8.62□□□□□ -1.03
HPS4-217ENST00000496385 RPP40O75818 363 aaKnown RBP8.62□□□□□ -1.03
HPS4-217ENST00000496385 FCER2P06734 321 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms